KEGG   Haliotis asinina (tropical abalone): 137276737
Entry
137276737         CDS       T10448                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein-like
  KO
K12857  Prp8 binding protein
Organism
hasi  Haliotis asinina (tropical abalone)
Pathway
hasi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hasi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    137276737
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hasi03041]
    137276737
Spliceosome [BR:hasi03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    137276737
 Complex C
   U5 SnRNP specific factors
    137276737
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_IFT122_1st NBCH_WD40 Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_DCAF4 eIF2A WD40_RFWD3 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_WDR19_1st Beta-prop_WDR75_2nd PEP5_VPS11_N Beta-prop_Vps41 WD_LRWD1 Cytochrom_D1 Beta-prop_IP5PC_F Beta-prop_VPS8 WDR54
Other DBs
NCBI-GeneID: 137276737
NCBI-ProteinID: XP_067664474
LinkDB
Position
3:complement(32021717..32039283)
AA seq 349 aa
MDHKRKAMDGAVVPVKRARGNEVVLADGETNGALLQSQSGPPRTSSLDGPIMLLTGHEGE
IFTAKFSPDGQIIASSGFDRLIYFWTVYGECENFAVLKGHTGAVMDLEFSTDGGMLFTVS
TDKTGAVWDVDSGTRIRKLKGHQTFVNSCNPARRGPQLVCTGSDDGTVKLWDARKKGVIQ
TFQNTYQVTAVSFNDTAEQIFSGGIDNDIKVWDLRKNDVLYRMRGHSDTVTGIEVSPDGS
YLLSNAMDNTLRVWDIRPFAPQERCVKIFQGHQHTFEKNLLHCSWSADGSKVTAGSGDRF
VYVWDTTSRRILYKLPGHAGSINEVDFHPHEPIVLSCSSDKKMFLGEIE
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggatcacaagcgaaaggcaatggacggagcagtggtacctgtgaaaagagcacgcgga
aatgaagttgtgttagcagacggcgaaacgaatggtgctttactacaaagtcagagtggt
ccacctcggacatctagtcttgatgggccaatcatgctgcttacaggccatgagggagaa
atatttactgccaaattctctccagatggtcagataattgcttcatctggatttgaccgt
ctcatatatttttggacagtatatggggaatgtgaaaactttgcagtattgaaagggcat
acaggagctgtaatggatttagaattctccacagatggaggaatgctgttcactgtatca
acagacaagacaggtgcagtgtgggatgttgattcaggaacacgaatacgcaagttgaaa
ggtcaccagacatttgtaaactcatgtaatcctgcaagaaggggtccacagctggtgtgt
acaggaagtgatgatggaacagtcaaattgtgggatgccagaaagaagggtgtgatacag
acattccagaacacataccaagtaacagccgtcagtttcaacgacacagcagaacagatc
ttctctggtgggattgacaatgacatcaaggtttgggacttgagaaagaatgatgtccta
tatcgaatgcgaggccactctgacacagtgacagggattgaagtcagcccagatgggtcc
tatctcctctccaatgccatggataatacattgagagtgtgggatatccgaccctttgca
ccccaagaacgatgtgttaagatatttcaaggtcatcaacatacatttgagaagaatctg
ttgcactgttcatggtcggcagatggcagcaaggtgacagcaggttctggtgaccgcttt
gtctatgtgtgggatacgacgtcacgaaggatcttatacaaacttcctggtcacgcaggc
tccatcaatgaagtggacttccaccctcatgaaccaatagtgctctcctgttccagtgat
aagaagatgttcctcggagaaatagagtga

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