Haliotis asinina (tropical abalone): 137278177
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Entry
137278177 CDS
T10448
Name
(RefSeq) DNA mismatch repair protein Msh6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
137278177
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hasi03400
]
137278177
DNA repair and recombination proteins [BR:
hasi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
137278177
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
PWWP
MutS_IV
MutS_II
MUM1-like_PWWP
Motif
Other DBs
NCBI-GeneID:
137278177
NCBI-ProteinID:
XP_067666471
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All DBs
Position
3:complement(54570804..54661340)
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AA seq
1349 aa
AA seq
DB search
MSIKQSNLFSFFTKTPNKAPNNETSKKAVLSPRRSPNSCKGKTPATNGKKTCDTNTEFQP
GAVVWAKLEGYPWWPSLVCNHPTEKKHTKGGKQVQLHVQFFDDPSSRAWVRAKYVKAFKG
SDDKEFQRGGQFHCHDTECYEGALKADAAMKMGVEERLSTLIVELQPSDSEESTEEVAEP
TEFDPDIFDAEMEDNEADNSKENHNDSMKTDDSKTSPGKTSSKKSRPSRSSGKHKRRRLM
LSTSGEEESGDEFKPDSGSSDEDDSGSSGEDEDNVSEPETESDAESPVKCRKRKRPSSTS
NPKPKSSSQPSIGNRFAGSMLSAERRHSFKPAVSDKTKSKLASFNAPEQVVSDTPDVHGD
FPHVKLDFLQPDKIRDIKGRRKDADDYDSRTVMVPETFLKKQTPAMRQWWELKMHHYDTV
LFFKMGKFYELFHMDAVIGVSELGLIYMKGEHAHSGFPEIAYSRYADSLIQKGYKVARVE
QTETPDMMADRCKQMSRTATKFDKVVKREVCQVTSRGTKTYRHIEGGNCSEVDSNYLLAI
CEKEAGSDGGSVYGVCFIDTSVGIFHLGQFTDDRYCSRLRTLIAHHTPSLVLYERGKMSA
KTVQLIKTNMSSALKESLASGTEFWDSSKTLKTLAEEDYFKEEGKDFEWPGGLKEMMSDS
DSLGLTASDEFDLAVHSLGAVTWYLQYSLLDQELLTMRKFVQYRPVDSTPIVEKTARQFS
QKHMVLDGVTLMNLDLVENCLTGGTEGTLLERLDQCCTPFGKRLFRQWLCAPLCSTAAIN
DRLDAVEDLITSQDLLVDMIEVMKKLPDLERLLSRIHTLGSASRSKKHPDSRAILYEEVT
YSKRKIEDFLATLGGFKSAFQMAQKVQTDISKFKSSLLKKTLSIRCTDTDQGHFPDISED
LAFFDAAFDHSKARKDGTILPSKGVNPDYDQATQDIKAVEKRLVQYLDKQRDRLSCMAMV
YWGTAKNRYQMEIPEVAWKRVPMEYEVMSSKKGWKRYRTPDIEDMLADLTEAEDRKDTAL
KDTMRRVFYSFDERHKKWRDVLDCLSVLDVIISLAQYSRCGDGVICRPELVDLGENVEPF
LELRNARHPCVARTFSGGDFIPNDTVIGVADEADEDGDYSRSRIVLVTGPNMGGKSTLMR
QVGLIAIMAQLGCYVPAEKCRLTPVDRVFTRLGASDRIMAGESTFFVELSETSAILQHAS
KHSLVLMDELGRGTATYDGTAIACSVVQELSSGVNCRTLFSTHYHSLVEEFSHDANIRLG
HMACMVENENEEDPSQETITFLYKFIKGACPKSYGFNAARLADIPEEVIKAAVGKAKEFE
ESFNRLKLLKSLWWECTADRVRAIQQVYS
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgtccataaaacaatcaaatctgttctctttcttcacaaaaacgccaaacaaagctcca
aataacgagacatcaaagaaagctgtgttgtcaccccgtcgatcaccgaattcgtgtaaa
gggaaaacacctgcaaccaacggcaagaagacttgtgacaccaacacagagttccagcct
ggtgctgttgtatgggccaaattggaggggtacccatggtggccaagtctggtgtgtaat
catccgactgagaagaaacataccaaaggaggaaaacaagtccagctgcatgtccagttc
tttgatgacccttcgtctcgggcctgggtccgtgcaaaatatgtcaaggccttcaaaggt
tcagacgacaaggagttccagcgaggaggtcagttccactgccacgatacagaatgttat
gagggagcactgaaggctgatgcggctatgaagatgggtgtggaggagcgactgtccact
ctgattgtagagctgcaaccttccgacagtgaggaaagtacagaggaggtagcagaaccc
actgagtttgaccctgatatttttgatgcggagatggaggacaatgaagctgacaacagc
aaggaaaaccataatgacagcatgaagactgatgacagcaagacaagtccagggaagaca
tcgagtaagaagagtcgtccttcgcgatcaagtggaaagcacaagagaaggcggcttatg
ttgtccacaagtggagaagaggagtcaggtgatgagttcaaaccagattccggcagcagt
gatgaagatgacagtggcagtagtggtgaagatgaggacaacgtgtctgaaccagaaaca
gaatctgatgctgaatctcctgttaagtgtaggaagaggaagcggccaagttcaacttca
aaccctaagcccaagtcctccagtcagcccagcatagggaacaggtttgcagggtccatg
ttgtcggcagagagacggcacagcttcaaacctgcagtgtcggataaaaccaagtcaaaa
cttgcatctttcaatgcaccagaacaagttgtttcagacacccctgatgttcatggagat
ttccctcatgtgaagctggacttcctacaaccagacaaaattagagatataaaggggaga
agaaaggatgctgatgactatgactcaaggacagtaatggtgccagaaactttccttaag
aaacagactccagcaatgcggcagtggtgggagctgaaaatgcatcattacgacacagtt
ttgtttttcaagatgggtaaattctatgagctgttccatatggatgctgtgattggtgtt
tctgagcttggtcttatttacatgaagggagagcatgcccattcaggattccctgagatt
gcatactcaaggtatgcagactccctgatacagaagggctacaaggtggccagagttgaa
cagactgagaccccagacatgatggcagacagatgtaaacaaatgtcacggactgcaacc
aagtttgataaagttgtgaagagagaggtgtgtcaggtgacctccaggggcaccaagacg
tatcgtcacatagagggaggaaactgcagcgaggttgacagcaactacctcttagccatt
tgtgagaaggaggcggggtctgatggaggcagcgtgtacggtgtttgtttcatagacact
tccgttggaatattccatctggggcagttcacagatgaccgttactgttcccgccttcgc
actctcatcgcccaccatactccatcgctggtgctgtatgagagagggaagatgtcagcc
aagacagtgcagttaatcaagaccaacatgtcgtctgccctgaaggaatcgcttgcatcg
gggacagagttctgggacagctctaagactctgaagacactagcagaggaagattacttc
aaggaggagggcaaagactttgagtggccaggaggcttgaaagagatgatgtctgatagt
gactctcttggattgactgccagtgatgagtttgacctggcagtgcattctttgggtgct
gtcacatggtacctccagtactcactgttagaccaggagctgttgaccatgaggaagttt
gtacagtaccggcctgtagactctactcccattgttgaaaagacagctcggcagttctca
cagaaacacatggtgctggatggggtgactctgatgaacctggacctcgtggagaactgc
ttgacaggaggaacggagggcactctgctggagaggctggaccagtgctgtactccgttt
ggcaagaggttgttccggcaatggttgtgtgctcctctgtgtagcacagcagctatcaac
gatcgtttagatgctgtagaagacctcatcacctcccaggatctgctggttgacatgatt
gaggtcatgaagaaattgcctgacctagagagactcctcagcagaatccacaccttaggg
tcagcaagcagaagcaagaagcaccctgacagcagagctatcctgtatgaagaagtcacc
tacagtaaaagaaagatagaagattttcttgcaacactaggaggatttaaatcagcattt
caaatggcacagaaagtccagactgacatatctaagttcaagtcctcactactgaagaag
actctctccattcgctgcactgatacagaccagggacactttcctgacatcagtgaggac
ttagcattctttgatgctgcttttgatcacagtaaagctcgtaaggatggaactatatta
ccaagtaaaggggtcaacccagactatgaccaggccactcaggacatcaaagccgttgag
aagagacttgtgcagtatctggacaaacagcgagatcgcctcagttgtatggcgatggtg
tattggggaactgccaagaaccgttaccaaatggagataccagaggttgcttggaaacgg
gtgcccatggagtatgaggtgatgtcatctaagaaaggatggaaacggtaccgaacaccg
gacattgaggacatgttggcagacttgacagaagctgaagatagaaaggatacagccctg
aaggacacaatgagaagagtattctacagctttgatgaaagacacaagaaatggcgtgat
gttttggactgcctctcagtgttagatgtgattatctcccttgctcagtactcccggtgt
ggagatggtgtcatttgccgtccagagcttgtggacctgggggagaatgttgagccattc
ctggagttgcgcaatgctcgtcacccatgcgtggcccggacattttctggtggagacttc
ataccaaatgacaccgttataggtgtagctgatgaggcagacgaggatggtgactattct
cgcagtcgcattgtgttggtgacggggcccaacatgggtggtaaatctacactcatgaga
caagtgggattgatagctatcatggctcagttgggctgttatgtgccagcagagaaatgt
cgactgactcctgtggaccgtgtctttactcgtcttggtgccagtgatagaataatggcg
ggggagagcacattctttgttgaactgagtgagacatcagcaatcttacaacatgccagc
aagcactctcttgttcttatggatgaactaggtcgtggcacagcgacatatgatggcaca
gccattgcctgctccgttgtgcaggagttatccagtggtgtcaactgtcgcactctcttc
tcaactcattatcactcactggtggaggagttcagtcatgatgctaacatcaggctggga
catatggcatgtatggtggagaatgagaatgaggaagacccatcccaggaaactatcacc
ttcttgtacaagtttatcaagggtgcatgccccaagagttatgggttcaacgctgctcgt
ctcgccgacattccagaggaggtgatcaaggcagcagttgggaaggcaaaagagtttgaa
gaaagttttaaccgattaaaacttcttaagtccctgtggtgggagtgcactgcggacaga
gtgcgtgccatacagcaggtttactcgtaa
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