Haliotis asinina (tropical abalone): 137278220
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Entry
137278220 CDS
T10448
Name
(RefSeq) regulator of nonsense transcripts 1-like
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03013
Nucleocytoplasmic transport
hasi03015
mRNA surveillance pathway
Brite
Enzymes [BR:
hasi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
137278220
5.6.2.5 RNA 5'-3' helicase
137278220
Messenger RNA biogenesis [BR:
hasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
137278220
mRNA cycle factors
Common to processing body (P body) and stress granule
137278220
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GFIT
Other DBs
NCBI-GeneID:
137278220
NCBI-ProteinID:
XP_067666536
LinkDB
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Position
3:57763351..57801659
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AA seq
1114 aa
AA seq
DB search
MSVDAYGPSSQTLTFLDTEETDLLGADTQGSDFDFTDFTLPSQTQSQTQASQLDGGQSQS
QGQVNGIDGPLQNGIDGGITGITQGVGELNFEEEEEEQFYMKDLPKYACAYCGIHDPACV
VFCNTTKKWFCNGRGNTSGSHIINHLVRAKAKEVTLHKDGPLGETVLECYNCGCRNVFLL
GFIPAKADSVVVLLCRHPCATLSNLKDMNWDPSQWQPLIQDRQFLSWLVKVPSDQDQMRA
RQISAQQINKLEELWKENPDAKLEDLEKPGVDEEPQQVLLRYDDAYQYQNIFGPLVKHEA
DYDKKLKESQTQDNIVARWDVGLNKKRIAYFHMSSANDEMKLMHGDELRLRYIGELHKPW
SGVGHVIKIPDNYSDEVAIELKSNAGVPTECTHNFVVDFVWKSTSFDRMQAALKTFAVDE
TSVWGYIYHKLLGHEVEDVVLKCQLPKRFSAPGLPELNHSQVYAVKTVLQRPTSLIQGPP
GTGKTVTSATIVYHLVKQNNGPVLVCAPSNIAVDQLTEKIHRTGLKVVRLCAKSREAIDS
PVSFLALHNQIRNMESVPELQKLQQLKDETGELSSQDEKRYRALKKQCEKELLQAADVIC
CTCVGAGDPRLAKMQFRSVLIDESTQATEPECMIPVILGCRQLILVGDHCQLGPVVMCKK
AARAGLSQSLFERLVVLGIRPIRLQVQYRMHPALSAFPSNIFYEGSLQNGVTAAERSRKN
LDFPYPQPDKPMFFYCTSGQEEISSSGTSYLNRTEAANVEKLTTRFLRSGIKPEQIGIIT
PYEGQRAYLVQYMQYSGALNKKLYQEIEVASVDAFQGREKDFIVLSCVRSNEHQGIGFLN
DPRRLNVALTRARYGIIIVGNPKVLSKQTLWNHLLTYFKEQKCLVEGPLNNLKESLIQFS
KPRKLVNTANPGGRFMSNTMFDAREVLIPGSIYDRSVGYREPVVRTHDQLSFIGPERAYT
GAALSLPVPVNMFLPQVPQHFQAQPMPQAGNKNMPPPRRMGQNQNQGRRQKPPRYSNMQQ
NISQFNLSGSQSQASQDASQSFSQGPLTQGHLSMSQPFQMSQPGLSGLSQAELSQDSFLA
EDFKSQADGMLSQDSTYQGDRMFYASQLSQGPFN
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtagatgcgtatggacccagctctcaaactttgactttcctggataccgaagaa
accgaccttctgggcgcagatacacaaggatccgacttcgacttcacagattttaccctt
ccgtcccagacccagtctcaaactcaagcctcgcagcttgatgggggacagagtcagagc
caaggccaggtgaatggtattgatggaccgctgcagaatgggattgatggaggaatcaca
ggcatcacacagggtgtgggtgagctcaactttgaggaagaagaagaggaacagttttat
atgaaagatcttccaaaatatgcatgcgcttattgtggaatccacgaccccgcctgcgtg
gtgttttgcaacacaacgaagaagtggttctgtaatggccgtggcaatacgtcaggaagc
cacatcatcaaccatttggtacgagcaaaggcaaaggaagtgacccttcacaaggatggc
ccactgggagagacagtgcttgagtgttacaactgtggctgtcggaatgtctttctcctt
ggcttcatccctgccaaggctgactcagtcgttgtcctgctgtgtcgccatccatgtgct
accctcagcaatctcaaggacatgaactgggatcccagtcagtggcaaccattgatacaa
gaccgtcagttcctgtcctggctggtgaaagtgccctccgaccaagaccagatgcgagct
aggcagatctcggctcagcagatcaacaagctggaggagctatggaaggaaaacccagat
gcaaaactggaagatcttgagaaaccaggggtagacgaagagccacaacaggtacttctc
aggtacgatgatgcataccagtatcagaacatctttggtccactggtgaagcatgaagct
gactatgacaagaagttgaaggagtcacagactcaagataacattgtggctcgctgggat
gtcggcctgaacaagaagaggattgcatactttcacatgtcctctgccaatgatgagatg
aaactgatgcatggagatgagttacgacttcgttacatcggagagttgcacaaaccatgg
tctggtgttggccacgtcatcaagatcccagacaattacagcgatgaagttgcaatagaa
ctcaagagcaacgcaggcgtaccaacagagtgtactcataactttgtggtggattttgtg
tggaagtcaacatcttttgacaggatgcaagcagcgctgaagacatttgctgtagatgag
acgtcagtgtggggctacatctaccacaagttacttggccatgaggtggaggatgtagta
ctcaagtgtcagctgccgaagcgcttctccgccccaggcctgcctgagttgaaccactcc
caagtgtatgcagtgaagactgtattgcagagacctacaagccttatccagggccctcct
ggaactggtaagacggtgacgtcagccacaattgtataccatcttgtgaagcaaaacaac
ggtcccgtcttggtgtgtgcaccttctaacattgcagtggatcaactgacggaaaagatc
catcgcacaggactcaaggttgtgcgactttgtgcaaagagtagggaagccatcgactca
cctgtatccttcctggcactgcacaatcagattagaaacatggagagcgtgccagagttg
cagaagctgcagcagctgaaagatgaaacaggagagttgtcctcccaggatgagaagagg
tatcgtgccctgaagaaacagtgtgaaaaggagctactgcaggctgctgatgtgatctgc
tgtacatgtgttggagctggtgatcctcgtcttgcgaagatgcagttccgatctgtgcta
attgatgagagcacacaagccactgagccggagtgtatgatccccgtcattctaggatgt
agacagctgatcctggtgggtgaccactgccaactgggtcctgtggtgatgtgcaagaaa
gcagcacgggcaggtctgtctcagtccctgtttgagagactggttgtcctgggcataagg
cccatcaggctgcaggtccagtaccgtatgcatcccgcactcagcgccttcccctccaac
atcttctatgagggctcactgcagaatggagtcacagctgctgaacgtagcaggaagaac
ctggatttcccctaccctcagccagacaagccaatgttcttctactgtacatctggccag
gaagagatttcaagctctggaacatcctaccttaacagaactgaggctgccaatgtagaa
aagttgacaacacgatttctgcggtctgggatcaagcccgagcagatcggtatcatcaca
ccatatgaaggccagcgggcatatcttgtccagtacatgcagtacagtggagctctcaac
aagaaactctaccaggaaattgaggtggcaagtgttgatgctttccaaggccgagagaag
gatttcattgtgctgtcttgtgtccgatccaatgagcaccaagggattggattcttgaat
gacccaaggcgtctcaatgttgcacttacaagagccagatacggcatcattattgttgga
aaccccaaagtgttatcaaagcaaaccctgtggaaccaccttttgacatacttcaaggaa
cagaagtgtctggtggaaggtcccctcaacaacctcaaggagagcctcatccagttcagt
aaaccacgcaagctcgtcaacacagctaaccctggaggcaggttcatgagcaacacgatg
tttgatgcaagggaagtgctgatcccaggcagcatctatgaccgatctgttggctaccgt
gagcctgtggtgaggacacacgaccagctcagcttcatagggccagagcgagcctacact
ggagcagccctgagtctgccggtccctgtcaacatgttcctcccacaggtgccccaacac
tttcaggcacaaccaatgccacaagctggaaacaagaacatgccacccccacgtcgtatg
ggtcagaaccaaaaccaaggtcgtcgtcagaaaccgccacgctacagcaacatgcagcag
aacatctcgcagttcaacttgtctgggtcccagagtcaggccagtcaggatgcatcacag
tcattctcacagggcccactgacccagggtcatctgtccatgagtcagccattccagatg
agtcagccagggctctctgggctgtcacaggctgagctgtcacaggatagcttcctagca
gaggacttcaagtcgcaggctgatggcatgttgtcacaggactcgacttaccagggagac
cgtatgttctacgcctcccagctgtcccaggggcccttcaactag
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