Haliotis asinina (tropical abalone): 137278504
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Entry
137278504 CDS
T10448
Name
(RefSeq) pre-mRNA-processing factor 6-like
KO
K12855
pre-mRNA-processing factor 6
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137278504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hasi03041
]
137278504
Spliceosome [BR:
hasi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
137278504
Complex C
U5 SnRNP specific factors
137278504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
HAT_PRP39_C
Suf
TPR_16
HAT_Syf1_CNRKL1_N
TPR_17
HAT_Syf1_CNRKL1_C
TPR_2
TPR_21
ChAPs
NatA_aux_su
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-GeneID:
137278504
NCBI-ProteinID:
XP_067666962
LinkDB
All DBs
Position
3:complement(78155737..78260853)
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AA seq
926 aa
AA seq
DB search
MSVQSLVSKKKRSFIGLPAPLGYVPGLGRGATGFTTRSDIGPARDADDIPEDRHAPPVKK
SKKDQEEDEEEDLNDANFDEFAGYGGSLCSKDPYDKDDEEADAIYDAVDKRMDEKRRERR
EEKLREELEKFRQERPKIQQQFSDLKRDLADVTVDDWNNLPEVGDARTKRQRNPRTEKYT
PVPDSILARAAASTGMNSALSEKEQQYGGLATPAGFSTPSGDIDMKKIGQARNTLMGIKL
TQVSDSVAGQTVVDPKGYLTDLQSMLPSHGGDINDVKKARLLLKSVRETNPKHPPAWIAS
ARLEEVTGKVQAARNLIMKGCEECPKSEDAWLEAARLMPGDQAKAVVAQAVRHLPSSVRV
WIKAADLEQELKARKRVFRKALEHIPNSVRLWKLAVEQEGEEDARIMLSRAVECCPTSVE
LWLALARLETYENARKVLNKARENIPTDRQIWVTAAKLEEAHGNNHMVEKIVERALNSLR
SNMVEINREHWLKDAEDCEKSGSIITCQAIVRAVISVGIEEEDRKHTWMEDADACAVHGA
YECARAIYAYALTVFPSKKSIWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGA
KSKWMANDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYERARRLLQKARASAPTA
RVFMKSVKLEWCLGEIESAKRLLDEAVKHYADFAKLCMMKGQIEEHRGNTESAREAYNLG
LKKCPHSIPLWLLLSRLEEKTGQLTRARSILEKARLKNPKCPDLWLEAVRVEIRGGLKNI
GQTLMAKALQECPNSGILWADAIFMEPRPQRKTKSVDALRKCEHDPHVLLAASKLFWTER
KIGKSRDWFNRTVKIDPDLGDAWAYFFKFELMHGDEQSQEDVARRCIQSEPHHGEKWCQV
SKDISNWRLKTEDLLPLVANAIPLPT
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgcagtcattagtaagcaagaaaaaacgaagttttatcgggttgccggcacca
ctgggctacgtaccaggtcttggaagaggagcaacaggatttacaactcgatctgatatt
ggtccagccagagatgcagatgacatacctgaagatcgtcatgctcctcctgtgaaaaaa
tctaagaaagaccaggaagaagatgaagaagaagatttgaatgatgccaactttgatgag
tttgctggttatggaggtagtctgtgtagtaaagatccttatgacaaagatgacgaggag
gcagatgccatatatgatgctgttgacaaacgaatggatgaaaagaggagggagaggaga
gaagaaaagcttcgagaagagctggagaaattccgtcaagaaagacccaaaattcaacaa
cagttctcagatctgaagcgagatcttgctgatgtgacagttgatgattggaacaaccta
ccagaagtgggcgatgctcggaccaagaggcagaggaatccacgaacagagaagtacaca
cctgtcccggacagcattctggctcgggctgcagcctctactgggatgaatagtgctctc
tcagagaaagaacagcaatatggaggcctggccacgccggctggcttctccactcccagt
ggagacatcgacatgaagaagattggtcaggccagaaacaccctgatgggcatcaagctc
acacaggtatcagactcagtagcaggccagactgtcgttgatcccaaaggctacctgacc
gacctacagtccatgttaccttcacatggaggagacatcaatgatgtgaagaaagcccga
ctcctgctgaagtcagtgagggaaaccaaccccaaacaccccccagcatggattgcgtct
gctcgtctggaggaggtgacaggcaaggtgcaggcagccaggaacctcattatgaaggga
tgtgaggagtgtccaaagagtgaagatgcctggcttgaggctgcaagactcatgcctggg
gaccaggccaaggctgtggtggcgcaggctgtccggcatctccccagctcggtcagggtg
tggatcaaagctgcggacttggagcaggagctgaaagcaaggaagagagtgttcagaaag
gcactggagcacatccccaactcggtgcgtctttggaagctggcggtggagcaggaaggc
gaggaggatgctaggattatgttgagtcgagccgtggagtgctgccccacaagtgtcgag
ctatggctggcattggcgagactggagacatatgagaacgcccgaaaggtgttaaacaaa
gcccgcgagaacatcccgacagacaggcagatctgggtcacagctgcaaagcttgaagaa
gcccatgggaacaaccacatggtggagaagatcgtggagagagctctcaactcacttcgc
tccaacatggtggagatcaacagggagcactggctgaaagatgcagaggactgcgagaag
agcggcagcatcatcacctgccaggccatcgtgcgagctgtgatcagtgttggtattgag
gaggaagaccgaaagcacacctggatggaggatgcagatgcttgtgcagttcatggagcc
tatgagtgtgcccgagccatctatgcctatgccctgacagtgttccccagcaagaagagt
atctggttgcgtgctgcgtacttcgagaagaaccatggaaccagggagtcgctagaggca
ctgcttcagagagctgtggcccattgccctaaagctgaagtgctttggctcatgggagcc
aagtccaagtggatggcaaatgatgtcccagcagcccgaagcatcctggcactggctttc
caggccaaccccaacagcgaggagatttggctcgctgctgtcaagctggagagtgagaac
aatgagtacgagagagctcgcagacttctgcaaaaagcccgagctagtgccccaacagct
agggtgttcatgaagtctgtgaagctggagtggtgtctgggtgagatcgagagcgccaag
cgcctgctggacgaggctgtgaaacactatgctgactttgctaagttgtgtatgatgaag
gggcagattgaggagcacagaggaaacacagagagtgcccgggaagcctacaatcttggg
ttgaagaagtgtccgcactccattccactgtggctgttgctgtctcggctggaggaaaag
acagggcagctgacaagggctcggtccatcctggagaaagcccggctgaagaaccccaag
tgcccagacctttggttggaggctgtgcgtgtggagatcagaggcggactgaagaacatt
ggacaaacccttatggcaaaagccctgcaggagtgtcccaactcaggtatcctttgggca
gacgctatcttcatggaaccacgaccccagaggaagacaaagtctgttgatgcactccgc
aagtgtgaacacgacccccacgttcttctagctgcatcaaagctgttctggactgaacgg
aaaatcggcaagtctcgtgactggtttaatcgcacagtgaagattgaccctgaccttggt
gatgcttgggcatatttcttcaagtttgaactgatgcatggagatgagcaaagccaggag
gatgtggcaagacgctgcatccagtccgagccccaccatggggagaagtggtgtcaggta
tctaaggacatcagcaactggaggctaaagaccgaagacttacttccccttgttgctaat
gccatacctttgccaacatga
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