Haliotis asinina (tropical abalone): 137278602
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Entry
137278602 CDS
T10448
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
hasi Haliotis asinina (tropical abalone)
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hasi03019
]
137278602
Enzymes [BR:
hasi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
137278602
Messenger RNA biogenesis [BR:
hasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
137278602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
HA2_C
DEAD
HA2_N
AAA_22
ResIII
AAA_25
Rad17
AAA_7
Motif
Other DBs
NCBI-GeneID:
137278602
NCBI-ProteinID:
XP_067667167
LinkDB
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Position
3:82424791..82474522
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AA seq
1270 aa
AA seq
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MTTSDDLSDSDSSLSKDRSSSSHKKKRKHRKLKKSKHKHHECHKSRVRERSPEYQHHHVS
HSKHEYSDYNKRHHDISRHRDGAGNTSSVHSARDANDSRRHKHQEKPSKRRLSAMEHDQA
RDISPNKFTDVKEDYETKFKDKKRQGEKASFDSDSEEEHLDLDFDFTQHKPSLNRIFFRD
QDFIRRGTKQYDDFWAFLVKYQEFQRKKAAKKQSTSKPSSRLEDEGRLGLPQTYDNRYRI
NLSLVSKDMELFLKKGRLVDYDVGRDLTRERVTKFKGILLHYLDFQQKQKFSKLKKIRTD
QENLPIFQYKTMICGMVKRHQVVVVAGDTGCGKSTQVPQYLMEAGFENIACTQPRRIACI
SLSKRVSYETLNEYGSAVAFQVRFEKSKTRATKILFLTEGLLLRQMSSDPYLKQYDVIVI
DEVHERHIFTDFLLGVLKCMLKKREDLKLVLMSATINIELFSGYFENAPVIRVPGRLHPI
ELEYQPIKRDEMTSRGEKLDPTPYLRIMQTIDHRYPATERGDLLIFLSGMTEIMTIVEAA
NQYAQQTKRWIILPLHSALSVQEQDKVFDISPEGVRKCIVSTNIAETSVTIDGVRFIVDS
GKVKEMNFDPKYKMQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYADTDYNSFQEYATP
EIKRVTLDTLILQMISLGLPDARRFPFIEAPAMSSIETSIAFLKEQGALTEDEALTPIGQ
MLSQLPVDVVIGKMLIMGSIFHMIDPVLTIAAAMSVQSPFTMKAHQDRDAIAARKPLESD
HGDPFTLLNAADEWIQVKAEGRGTKKWCQRRGLEEQRFYEMNKLKRQFRELLRDHGLLDE
VKEEERYYTSEERRQRHGERKRLGQLKREQNNESKKRKVLKFTEDDYQLSDGDEDDKGDD
IKDLEFRLSHDLNQLQETANKTRSFNLRDINLLKVILCSGLYPQVALADDCNSYKGDSEQ
AFHTKNKAFILLHPTSVFASKPEVLRPSDIKDNKTTPSELRGRLSSKHEVLAFVSVLETN
KPYLINTMRVPALQTITLFSNCIDANADCTRLVCDGWLEIRFPDAESADSVISSILHLRA
TWLNLLRVRLEDTMSMVDDQRKMSTRARRLEQLLARKLAEFLDSKVTYSIRRIMAAEQQH
LYVGMSTEGQDNEKSVKGGTQVNSYLTVGCLLDDTSASVWEEYTSHMQKVWECPRCHVSL
IVSVVERLQHQMECQSGDKPLSKDEEAAERESERASQLNPLRKSYFCPECDEQLSLTATE
ILKHKKSHKV
NT seq
3813 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaagcgacgatctgagtgattccgattcttctctgtcaaaagataggtcttct
tctagtcataaaaagaaacgtaaacatagaaaactcaaaaagtcaaaacataaacaccac
gaatgtcacaaatccagggtaagggagcgtagtccggagtaccaacatcatcatgtatct
cattcaaagcatgaatattcagattacaataagaggcatcacgacatcagcagacacaga
gatggggctggcaacactagcagtgtacatagtgcgagagatgccaacgatagccgtaga
cataagcatcaggaaaagccgtcaaaacgtaggctaagcgctatggaacatgaccaggca
cgggacatttctcccaacaaattcactgatgtaaaagaagactatgaaacaaagtttaag
gacaaaaagcgtcaaggagaaaaggcttcgttcgattcagattccgaagaggaacacctg
gacttggactttgatttcactcagcataagccatcgttgaacagaatatttttcagagat
caggacttcataaggagaggaaccaaacagtatgatgacttttgggcattcctagttaaa
tatcaagagtttcaacggaagaaagcagccaaaaaacagagtacaagtaaaccatcttcg
agactggaagatgaggggagactcggtcttccacaaacatatgacaaccgttatcgcatc
aatttgtcactggtgagcaaggacatggaactgttcctcaagaaggggagacttgttgac
tacgatgtggggcgagacctaactcgagagagagtgaccaagttcaagggcatcctgctt
cactatctcgacttccaacagaaacagaagttttccaagttgaagaagatccgtacagac
caggagaatttgcccattttccagtacaagaccatgatctgtggtatggtgaagcgccac
caagtggttgttgttgccggggatacaggatgtggcaagtccacacaggtacctcagtat
cttatggaggcagggtttgagaacatcgcctgtacacagccaaggagaattgcctgtatc
tctctatccaagcgagtcagctatgagaccctcaatgagtatggctcagccgtagccttc
caggtacgctttgagaaaagcaaaacaagagctaccaaaatcctcttcctgacagaagga
ttgttgctgagacagatgtcatctgatccttacctgaaacagtatgatgtcattgtgatt
gatgaggttcatgaacgccacatcttcactgacttcctgttgggtgtgctgaagtgcatg
ctcaagaagagggaggacctcaaactggtgctcatgtctgccaccatcaacattgagctc
ttcagcgggtacttcgagaacgccccagtcatccgggttcctggacgtcttcatcctatt
gagttagaatatcagccaatcaaacgtgatgagatgacaagtcgaggtgaaaagttggat
ccgactccgtacctccgtataatgcagacaattgaccaccggtacccagccactgagcga
ggtgatctgctgatatttctgagtgggatgacagagattatgactattgtggaggcagcc
aatcagtatgctcagcagaccaagagatggatcatccttcccctccatagtgccctgtca
gtccaggaacaggacaaggtatttgacatctctcctgagggtgtgagaaagtgcattgtg
tctacgaacattgcagagacgtcagtgactattgatggtgtacggttcattgtagactct
ggcaaggttaaggaaatgaactttgaccccaagtataagatgcagcgtcttcaggagttc
tggatcagtcgtgcaagtgccgaacaaaggaagggccgggcaggtcggacgggtccaggg
gtctgctaccgcctgtatgctgacactgactacaactccttccaggagtatgctacccct
gagataaaacgtgtcacgctggataccctcatcctccagatgatctcccttgggttgccc
gatgcaaggagattcccttttattgaggctccagcaatgtccagcattgagacctcaata
gcattcctcaaggagcagggggctttgactgaggatgaggcactgactcctattgggcag
atgttatctcagctaccagtggatgtggtcatcggcaagatgctcatcatgggctccatc
ttccatatgatagacccagtgttaacgattgcggcagccatgagtgtacagtctccgttt
actatgaaggcccaccaagacagagatgctattgcagcaaggaagcccttggagtcggac
catggtgaccccttcacgctgctgaatgcagcagatgaatggatacaggtaaaggctgag
ggacgaggaaccaagaagtggtgtcagagacgaggtcttgaggaacagaggttttatgag
atgaacaaactaaagcgacagtttcgggaactcctgagggaccatgggctgttggatgaa
gttaaggaagaagagcgctactataccagtgaggaacgacgacagcgtcatggggagagg
aagcgtctggggcagttgaagagagaacagaataatgagtccaagaagaggaaagttctc
aagttcactgaggatgactaccagctgagtgatggggatgaagatgacaagggcgatgac
atcaaggatcttgaattccggctgtcacatgaccttaatcagctacaggagacagcaaac
aagacccggagcttcaatcttcgtgatatcaacttgctcaaggtgatcctgtgcagtggg
ctgtacccccaggtggcgctagctgatgattgcaactcctacaagggtgactctgagcag
gctttccatacaaagaacaaggctttcatcctcctgcatccaacaagtgtattcgccagc
aaacccgaggtgttgcgaccaagtgatatcaaggacaacaagaccacccccagtgagcta
aggggtcgactgagcagcaaacatgaggttcttgcatttgtttctgtcctggaaaccaac
aagccttacctgatcaacacgatgcgggtaccagcgctgcagaccatcaccctcttctcc
aactgcattgatgctaatgccgactgcaccaggttggtgtgtgacggttggctggagatc
cggttccctgatgcagagtctgctgatagtgtcatatccagcatcttacatctccgagcc
acatggctgaacttacttcgagtacgtctggaagacacgatgagcatggtggatgaccag
aggaagatgagcaccagagcccggcgcctggaacagctcctcgctcgtaaactggctgag
ttcctagacagtaaggtcacatactcaatacgacggataatggctgccgaacagcagcac
ctgtatgtagggatgagtacagaaggtcaagataatgagaagtcagttaaaggaggaaca
caagtcaattcctatttaacggttggctgcctccttgatgatacctcagccagtgtgtgg
gaagaatacacatcacacatgcagaaagtgtgggaatgcccacgatgtcacgtgagcctg
attgtgtctgtggtggaacgcctccagcatcagatggagtgtcagagtggtgataagcct
ttatctaaagatgaggaggctgcagaacgtgaatcagagcgagcctcacagctcaaccct
ctgagaaagtcctacttctgcccagagtgtgacgagcagctctccctgactgctacagaa
atcctcaaacacaagaaatcacacaaagtatga
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