Haliotis asinina (tropical abalone): 137281811
Help
Entry
137281811 CDS
T10448
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi04512
ECM-receptor interaction
hasi04820
Cytoskeleton in muscle cells
Brite
Exosome [BR:
hasi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
137281811
Glycosaminoglycan binding proteins [BR:
hasi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137281811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
137281811
NCBI-ProteinID:
XP_067669531
LinkDB
All DBs
Position
4:complement(67944910..68017166)
Genome browser
AA seq
1809 aa
AA seq
DB search
MILCCSGASPVTGTANLFHTHRVPSSSRRIKAMSTWLLLSISVIALGTLSQGVSAQRDVR
GRERERGDLDPKRCGAGCETGGNCRCTGEKGSRGAPGAIGPSGPQGNQGFPGPEGLPGPK
GMKGDIGPNGPIGEKGARGKMGSPGFSGINGIPGFPGPPGPRGATGLDGCNGTQGDPGAP
GLPGLPGEPGTPGLDGLPGLKGEPSVAGVTLPGQKGEPGADGLPGLPGSHGRDGPIGPKG
EPGLAGPPGPLGERGPQGEKGNMGLGTHGEKGQKGSTGPPGNPGPPGDLGALTNPPGQIQ
GPKGLKGMIGDEGMKGEPGLPGMKGPSGLQGLPGPPGMIGEKGVPGIAGPRGKQGYPGVP
GQPGQKGDRGMDGLPGVPGLPGMKGDRGLTGVDGLRGQRGPPGPAGGPGGDGPPGPVGPA
GPRGLPGDPGLPGLPGPQGLRGNDGPSGGPGIPGVPGTQGLDGPKGERGDAGVPGIAGLD
GRPGAPGLSGQKGEPGFPGESGASIPGVRGPPGLPGLDGIPGAKGERGPKGLPGPPGNST
KGLPGPSGPKGEKGQGGFSGLPGRDGLPGLPGDKGDRGGSCSLCQNGVKGEKGLSGLDGL
PGQPGVPGEPGPVGSKGEPGEDGPPGLPGLPGLRGEDGLPGLPGIQGIKGEDARAEVIPG
PEGFKGERGDVGLPGESGRRGLPGPQGPPGAPGLPGIKGERGTKGLPGLDGRPGNPGEPG
IPGSRGQPGIGLPGFPGDRGDPGVSGLPGLPGMKGTKGEPGILPLNIINTLKGEKGESGL
SGPSGIPGMPGLPGQKGNPGLPGKTGVDGLPGFKGEGGLPGLPGLSGPRGLPGPRGDKGE
PGLPGLPGPNGLKGDGGLPGLPGISGLKGETGFPGEPMVGPKGEPGLPGLPGEKGLVGYA
GPEGLPGAPGLPGLKGEAGQPGLPGLDGLPGVKGEPGLDGQPGFPGNDGQEGLPGLPGEP
GSKGDSGLPGLPGLSGPKGEPGEPGPAGQAGLPGLSGVRGPPGPPGQDGLPGLPGVKGES
GLMGFPGEPGRDGLPGLQGLAGLKGEPGAPGFPGEIGREGIRGPKGSSGLPGLPGLKGDA
GEAALPGLPGDRGEDGLPGIPGERGQDGLPGLSGEKGNPGEPGVGLPGRDGEPGVPGRDG
EPGLPGLAGPKGNPGPVGFPGLKGERGQPGLDGRPGQPGRDGLSGMKGNSGLPGLPGAPG
SKGESGLPGLPGTPGIKGDAGLDGRPGLPGLPGPKGDRGFNGRDGEPGLPGLKGEVGDSG
LPGLPGLSGAKGSPGLSGLPGTPGEKGEPGFPGLDGLPGQPGPQGERGLDGPAGPPGLPG
RSTQGLKGEPGRLGQPGNDGRPGLKGDPGMPGLDGLPGIKGEPGQSTDGLPGLKGEPGLP
GRAGLPGEPGPRGNDGLSGLPGLKGDRGQPGFPGEQGRDGLPGLSGSKGNAGLPGLPGIS
GDKGDSGLPGLPGLLGPKGDPGLPGLPGLDGAPGQPGAFGLKGEPGLPGVVNYEQLPKGD
RGFKGDPGLNGLPGLSGPKGEPGRPGSPGVPGEPGPTGLPGFKGERGPQGLRGLDGLPGT
AGTPGQRGPSGLPGDRGLPGRSPPTGFLLVRHSQSQQVPSCPRGQAQMWDGYSLLYIEGN
EKSHHQDLGWAGSCMPRFSTMPFLFCNVDNVCNYASRNDRSYWLSTTAPIPMMPVAEGEI
RPYISRCVVCDAPANVIAVHSQTLQIPDCPNGWNGLWIGYSFAMHTAAGPGGGGQSLSSP
GSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTIEMNEQFSSPRSQTLKAGNLRTRVS
RCQVCIKNV
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgattttgtgttgctcgggtgccagtccagtgactggcactgccaacctctttcataca
catagagtaccgagttcgtcccgtagaattaaggccatgtctacatggctgcttctcagc
atctctgtgatcgccttagggaccctttctcaaggcgtcagcgcacaaagagatgtgaga
ggaagagaaagagaaagaggtgatttagatcctaaacgatgtggagctggctgcgagact
ggaggaaactgcagatgcactggagaaaaaggttccaggggtgcaccaggagctattggt
ccatctggtccgcaaggtaaccaaggcttccctggacccgaaggccttcctggacccaag
ggtatgaagggtgacattggccccaatggaccaatcggagaaaagggagccaggggaaag
atggggtcacctggtttctctggcatcaacggtattcctggattccctggcccacctgga
cctcgaggtgctactggtctggatggttgcaatggaactcagggagatcctggagctcct
ggtctgccaggtcttcctggagaacctggtacacctggtctcgatggtcttcctggtctt
aagggagaaccgtcagttgctggagtaacccttccaggacagaagggagagcctggagca
gatggtctacccgggttgcctggaagtcacggaagagatggacctattggccccaaggga
gagcctggtttagcaggaccacccggtccccttggtgaacgaggaccccaaggagagaaa
ggtaacatgggtttgggcactcatggagaaaagggtcagaaaggatccacaggaccccca
ggcaaccccggacccccaggtgatctaggagctctcaccaatcctccaggccaaatccaa
ggacctaagggactgaaaggcatgattggagatgagggtatgaagggagaacctggtctg
cctggcatgaaggggccctccggtctgcagggcctacctggtcctccaggaatgattggt
gagaagggcgtacctggcattgctggtcctcgtggtaaacaaggctatcctggtgttcct
ggacaacctggacaaaagggtgaccggggaatggatggtcttcctggtgtccctggcctt
cctggtatgaagggagatcgtggtctaactggtgttgatggtcttcgtggtcagagaggt
ccccctggtccagctggaggacctggaggagatggtccacctggtccagttggacctgct
ggtccacgtggtctgcccggtgatcctggactgcccggccttcctgggccacaaggtcta
cgtggtaatgatggtccctctggtggccctggaatccctggagtacctggtactcaaggt
cttgatggccccaaaggagaaagaggagatgctggagttccaggtattgctggtctggat
ggtcgccctggtgctcctggtttatctggacagaagggagagcctggtttcccaggtgaa
agtggagcaagtattcctggtgttaggggaccacctggtttgcctggtctggatggtatt
cctggggcgaagggcgagagaggtcctaaaggtctgcctggtccacctggaaattctacc
aagggtttgcccggcccctcaggtcccaagggagaaaagggccagggagggttctctggt
ttacctggtcgtgatggtcttcctggtctccctggagataaaggtgaccgtggcggttcc
tgcagtctgtgtcagaatggtgtaaagggagagaaaggtctgtctggtctagatgggctc
cctggacagcctggtgttccaggagagcctggaccggttggatccaagggagagcctggc
gaggatggtcctccaggtctgcctggcctccctggtctcaggggtgaggatggtctgcct
ggtctgcctggtattcaaggtatcaaaggagaagatgcaagagcagaggtcatacctgga
cctgagggtttcaagggtgaacgtggtgatgttggtctccctggtgagtctggtcggcga
ggtcttcctggacctcagggtccccctggagctccaggtctgccgggaatcaagggagag
aggggaacaaaaggccttcccggtttagatggtcgccctggcaacccaggagaacctggt
attcctggctcaagaggccaacctggaattggtttaccgggtttccctggagaccgtggt
gacccaggagtgtctggtctgccaggtcttcctggtatgaaaggaacaaagggagaacca
ggaattcttccccttaacatcattaacacattgaagggagaaaaaggagaatcaggtctg
tctggtccctcaggtatccctggcatgccaggtttgccaggacagaagggaaatccaggt
ttgcctggcaaaactggtgtggatggcttacctggatttaagggagaaggtggtctgcct
ggtttacctggcttgtctggtccaagaggtcttcctggtccacgaggggataaaggtgaa
ccaggactgccaggtttgccaggaccaaatggactgaaaggagatggtggacttcctggt
cttccaggcatttcaggtttgaaaggagagactggattccctggagaacctatggtggga
cccaagggagaacctggtttgccaggtctgcctggagaaaaaggacttgttggttatgct
ggcccagaaggtctgcctggtgcacccggcttgcctggtctcaagggtgaagctggccag
cctggtttgcctggtcttgatggtcttcctggtgtcaaaggggagcctggactcgatgga
caacctggatttcctggaaatgatggacaagagggtctgcctggactccccggtgaacct
ggcagtaagggtgattctggcctgcctggcctccctggcctgtctggacccaagggcgag
cctggtgagcctggacctgcaggacaagctggccttcctggactctctggcgtccgagga
ccaccaggaccacctgggcaagatggtttgcctggactgcccggtgtgaagggtgaatct
ggattgatgggtttccccggtgaacctggacgcgatggtctgcctggtcttcagggtttg
gctgggctcaagggagaacctggtgcacctggcttccctggtgaaattggtcgtgaaggc
attagaggaccaaagggtagtagtggtctgcctggcctgcctggtctgaagggagatgct
ggtgaggcagcactgcctggacttcctggtgacagaggagaggatggtctacctggaata
cctggtgaacgtggacaggacggtctgcctggtctgtctggagagaaaggaaacccaggt
gagccgggtgttggcttgcctggcagagatggtgaacctggtgtgccaggacgtgatgga
gagcctggacttcctggtctggcaggaccaaagggaaatcctgggccagtaggattccct
ggtctaaagggagaaaggggacaacctggtcttgatggtcgccctggccagcctggaaga
gatggtctgtctggaatgaaaggaaactctggccttcctggcctgcctggtgctcctggt
agcaagggtgagtctggtctacctggcctgccaggtacgcctggcattaagggtgatgca
ggactggatgggcggccaggtctgcctggtttgccaggtccaaagggagacagaggattc
aatggtcgggatggagaaccaggacttcccggacttaagggagaagtgggtgactctggc
ttgccagggctcccaggtttgtctggagctaaaggatcacctggcctgtctggtcttcct
ggaactccaggagagaagggcgagcctggattcccaggtctggatgggcttcctggtcag
ccaggacctcaaggagagagaggtttggatggccctgctggtccccctggtctgcctggt
cgctcaacacaaggtctgaagggagagcctggacgtttaggccagcctggtaatgatgga
cgtccaggactgaagggagatccaggtatgcctggacttgatggcctgcctggtataaag
ggtgaacctggacaatccactgatggtcttcctggactgaagggagaacctggacttcct
ggacgagctggcctgcctggagagcctggaccacgtggtaatgatggcctgtctggattg
cctggtctcaagggtgaccgtggacagcctggcttccccggagagcagggacgtgatggc
cttcctggtctaagtggatctaagggtaacgctggcttgcctggactccctggtatctct
ggtgataagggagatagtggtcttcctggtcttcctggactcctgggaccaaagggagat
cctggtctgcctggtctgcctggtctggatggagcaccaggtcaacctggtgcctttggt
ttgaagggagagcctggtttgcccggcgttgtgaattacgaacaacttcctaaaggagat
agaggattcaagggagatcctggtcttaatggtctcccaggcctttccggacccaaggga
gaacctggacgccctggatctcctggagtacctggtgaacctggtccaactggtctgcct
ggattcaagggagaacgtggtccccaaggtctgcggggtctggatggtctgcctggaact
gcaggaacaccaggtcagcgcggtcctagtggtttgcctggtgaccgaggtctacctgga
cgttccccacccactggcttcctgcttgtgcgacactcccagtctcagcaagtacccagc
tgcccaagaggtcaagcccagatgtgggatggttacagcttgctgtatattgaaggaaat
gaaaagtcacaccaccaggacctaggatgggccggctcctgcatgccacgtttcagcacc
atgcctttcttgttctgtaacgtggacaatgtctgcaactacgctagcagaaacgacagg
tcctactggctttcaacaactgctcctattcccatgatgcctgtagcagagggagaaatc
cggccatatatcagtcgctgtgttgtatgcgatgctcccgctaatgtgatcgctgtccac
agtcaaacactgcagataccagattgtcccaatggatggaatggactctggataggatac
agttttgctatgcatacagcagcaggccctggtggtggtggccagtctctctccagccct
ggcagttgtcttgaagacttccgagccactccattcattgaatgtaatggtgctcgtggc
acatgtcattactttgctaataaatacagcttctggctcactactatagaaatgaatgaa
caatttagttcaccacgttcacaaacacttaaagcaggaaacctccggactagagttagt
agatgtcaagtttgcatcaaaaatgtgtga
DBGET
integrated database retrieval system
