Haliotis asinina (tropical abalone): 137281811
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Entry
137281811 CDS
T10448
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi04382
Cornified envelope formation
hasi04512
ECM-receptor interaction
hasi04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
137281811
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
137281811
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
137281811
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hasi04147
]
137281811
00536 Glycosaminoglycan binding proteins [BR:
hasi00536
]
137281811
Exosome [BR:
hasi04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
137281811
Glycosaminoglycan binding proteins [BR:
hasi00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
137281811
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
137281811
NCBI-ProteinID:
XP_067669531
LinkDB
All DBs
Position
4:complement(67944910..68017166)
Genome browser
AA seq
1809 aa
AA seq
DB search
MILCCSGASPVTGTANLFHTHRVPSSSRRIKAMSTWLLLSISVIALGTLSQGVSAQRDVR
GRERERGDLDPKRCGAGCETGGNCRCTGEKGSRGAPGAIGPSGPQGNQGFPGPEGLPGPK
GMKGDIGPNGPIGEKGARGKMGSPGFSGINGIPGFPGPPGPRGATGLDGCNGTQGDPGAP
GLPGLPGEPGTPGLDGLPGLKGEPSVAGVTLPGQKGEPGADGLPGLPGSHGRDGPIGPKG
EPGLAGPPGPLGERGPQGEKGNMGLGTHGEKGQKGSTGPPGNPGPPGDLGALTNPPGQIQ
GPKGLKGMIGDEGMKGEPGLPGMKGPSGLQGLPGPPGMIGEKGVPGIAGPRGKQGYPGVP
GQPGQKGDRGMDGLPGVPGLPGMKGDRGLTGVDGLRGQRGPPGPAGGPGGDGPPGPVGPA
GPRGLPGDPGLPGLPGPQGLRGNDGPSGGPGIPGVPGTQGLDGPKGERGDAGVPGIAGLD
GRPGAPGLSGQKGEPGFPGESGASIPGVRGPPGLPGLDGIPGAKGERGPKGLPGPPGNST
KGLPGPSGPKGEKGQGGFSGLPGRDGLPGLPGDKGDRGGSCSLCQNGVKGEKGLSGLDGL
PGQPGVPGEPGPVGSKGEPGEDGPPGLPGLPGLRGEDGLPGLPGIQGIKGEDARAEVIPG
PEGFKGERGDVGLPGESGRRGLPGPQGPPGAPGLPGIKGERGTKGLPGLDGRPGNPGEPG
IPGSRGQPGIGLPGFPGDRGDPGVSGLPGLPGMKGTKGEPGILPLNIINTLKGEKGESGL
SGPSGIPGMPGLPGQKGNPGLPGKTGVDGLPGFKGEGGLPGLPGLSGPRGLPGPRGDKGE
PGLPGLPGPNGLKGDGGLPGLPGISGLKGETGFPGEPMVGPKGEPGLPGLPGEKGLVGYA
GPEGLPGAPGLPGLKGEAGQPGLPGLDGLPGVKGEPGLDGQPGFPGNDGQEGLPGLPGEP
GSKGDSGLPGLPGLSGPKGEPGEPGPAGQAGLPGLSGVRGPPGPPGQDGLPGLPGVKGES
GLMGFPGEPGRDGLPGLQGLAGLKGEPGAPGFPGEIGREGIRGPKGSSGLPGLPGLKGDA
GEAALPGLPGDRGEDGLPGIPGERGQDGLPGLSGEKGNPGEPGVGLPGRDGEPGVPGRDG
EPGLPGLAGPKGNPGPVGFPGLKGERGQPGLDGRPGQPGRDGLSGMKGNSGLPGLPGAPG
SKGESGLPGLPGTPGIKGDAGLDGRPGLPGLPGPKGDRGFNGRDGEPGLPGLKGEVGDSG
LPGLPGLSGAKGSPGLSGLPGTPGEKGEPGFPGLDGLPGQPGPQGERGLDGPAGPPGLPG
RSTQGLKGEPGRLGQPGNDGRPGLKGDPGMPGLDGLPGIKGEPGQSTDGLPGLKGEPGLP
GRAGLPGEPGPRGNDGLSGLPGLKGDRGQPGFPGEQGRDGLPGLSGSKGNAGLPGLPGIS
GDKGDSGLPGLPGLLGPKGDPGLPGLPGLDGAPGQPGAFGLKGEPGLPGVVNYEQLPKGD
RGFKGDPGLNGLPGLSGPKGEPGRPGSPGVPGEPGPTGLPGFKGERGPQGLRGLDGLPGT
AGTPGQRGPSGLPGDRGLPGRSPPTGFLLVRHSQSQQVPSCPRGQAQMWDGYSLLYIEGN
EKSHHQDLGWAGSCMPRFSTMPFLFCNVDNVCNYASRNDRSYWLSTTAPIPMMPVAEGEI
RPYISRCVVCDAPANVIAVHSQTLQIPDCPNGWNGLWIGYSFAMHTAAGPGGGGQSLSSP
GSCLEDFRATPFIECNGARGTCHYFANKYSFWLTTIEMNEQFSSPRSQTLKAGNLRTRVS
RCQVCIKNV
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgattttgtgttgctcgggtgccagtccagtgactggcactgccaacctctttcataca
catagagtaccgagttcgtcccgtagaattaaggccatgtctacatggctgcttctcagc
atctctgtgatcgccttagggaccctttctcaaggcgtcagcgcacaaagagatgtgaga
ggaagagaaagagaaagaggtgatttagatcctaaacgatgtggagctggctgcgagact
ggaggaaactgcagatgcactggagaaaaaggttccaggggtgcaccaggagctattggt
ccatctggtccgcaaggtaaccaaggcttccctggacccgaaggccttcctggacccaag
ggtatgaagggtgacattggccccaatggaccaatcggagaaaagggagccaggggaaag
atggggtcacctggtttctctggcatcaacggtattcctggattccctggcccacctgga
cctcgaggtgctactggtctggatggttgcaatggaactcagggagatcctggagctcct
ggtctgccaggtcttcctggagaacctggtacacctggtctcgatggtcttcctggtctt
aagggagaaccgtcagttgctggagtaacccttccaggacagaagggagagcctggagca
gatggtctacccgggttgcctggaagtcacggaagagatggacctattggccccaaggga
gagcctggtttagcaggaccacccggtccccttggtgaacgaggaccccaaggagagaaa
ggtaacatgggtttgggcactcatggagaaaagggtcagaaaggatccacaggaccccca
ggcaaccccggacccccaggtgatctaggagctctcaccaatcctccaggccaaatccaa
ggacctaagggactgaaaggcatgattggagatgagggtatgaagggagaacctggtctg
cctggcatgaaggggccctccggtctgcagggcctacctggtcctccaggaatgattggt
gagaagggcgtacctggcattgctggtcctcgtggtaaacaaggctatcctggtgttcct
ggacaacctggacaaaagggtgaccggggaatggatggtcttcctggtgtccctggcctt
cctggtatgaagggagatcgtggtctaactggtgttgatggtcttcgtggtcagagaggt
ccccctggtccagctggaggacctggaggagatggtccacctggtccagttggacctgct
ggtccacgtggtctgcccggtgatcctggactgcccggccttcctgggccacaaggtcta
cgtggtaatgatggtccctctggtggccctggaatccctggagtacctggtactcaaggt
cttgatggccccaaaggagaaagaggagatgctggagttccaggtattgctggtctggat
ggtcgccctggtgctcctggtttatctggacagaagggagagcctggtttcccaggtgaa
agtggagcaagtattcctggtgttaggggaccacctggtttgcctggtctggatggtatt
cctggggcgaagggcgagagaggtcctaaaggtctgcctggtccacctggaaattctacc
aagggtttgcccggcccctcaggtcccaagggagaaaagggccagggagggttctctggt
ttacctggtcgtgatggtcttcctggtctccctggagataaaggtgaccgtggcggttcc
tgcagtctgtgtcagaatggtgtaaagggagagaaaggtctgtctggtctagatgggctc
cctggacagcctggtgttccaggagagcctggaccggttggatccaagggagagcctggc
gaggatggtcctccaggtctgcctggcctccctggtctcaggggtgaggatggtctgcct
ggtctgcctggtattcaaggtatcaaaggagaagatgcaagagcagaggtcatacctgga
cctgagggtttcaagggtgaacgtggtgatgttggtctccctggtgagtctggtcggcga
ggtcttcctggacctcagggtccccctggagctccaggtctgccgggaatcaagggagag
aggggaacaaaaggccttcccggtttagatggtcgccctggcaacccaggagaacctggt
attcctggctcaagaggccaacctggaattggtttaccgggtttccctggagaccgtggt
gacccaggagtgtctggtctgccaggtcttcctggtatgaaaggaacaaagggagaacca
ggaattcttccccttaacatcattaacacattgaagggagaaaaaggagaatcaggtctg
tctggtccctcaggtatccctggcatgccaggtttgccaggacagaagggaaatccaggt
ttgcctggcaaaactggtgtggatggcttacctggatttaagggagaaggtggtctgcct
ggtttacctggcttgtctggtccaagaggtcttcctggtccacgaggggataaaggtgaa
ccaggactgccaggtttgccaggaccaaatggactgaaaggagatggtggacttcctggt
cttccaggcatttcaggtttgaaaggagagactggattccctggagaacctatggtggga
cccaagggagaacctggtttgccaggtctgcctggagaaaaaggacttgttggttatgct
ggcccagaaggtctgcctggtgcacccggcttgcctggtctcaagggtgaagctggccag
cctggtttgcctggtcttgatggtcttcctggtgtcaaaggggagcctggactcgatgga
caacctggatttcctggaaatgatggacaagagggtctgcctggactccccggtgaacct
ggcagtaagggtgattctggcctgcctggcctccctggcctgtctggacccaagggcgag
cctggtgagcctggacctgcaggacaagctggccttcctggactctctggcgtccgagga
ccaccaggaccacctgggcaagatggtttgcctggactgcccggtgtgaagggtgaatct
ggattgatgggtttccccggtgaacctggacgcgatggtctgcctggtcttcagggtttg
gctgggctcaagggagaacctggtgcacctggcttccctggtgaaattggtcgtgaaggc
attagaggaccaaagggtagtagtggtctgcctggcctgcctggtctgaagggagatgct
ggtgaggcagcactgcctggacttcctggtgacagaggagaggatggtctacctggaata
cctggtgaacgtggacaggacggtctgcctggtctgtctggagagaaaggaaacccaggt
gagccgggtgttggcttgcctggcagagatggtgaacctggtgtgccaggacgtgatgga
gagcctggacttcctggtctggcaggaccaaagggaaatcctgggccagtaggattccct
ggtctaaagggagaaaggggacaacctggtcttgatggtcgccctggccagcctggaaga
gatggtctgtctggaatgaaaggaaactctggccttcctggcctgcctggtgctcctggt
agcaagggtgagtctggtctacctggcctgccaggtacgcctggcattaagggtgatgca
ggactggatgggcggccaggtctgcctggtttgccaggtccaaagggagacagaggattc
aatggtcgggatggagaaccaggacttcccggacttaagggagaagtgggtgactctggc
ttgccagggctcccaggtttgtctggagctaaaggatcacctggcctgtctggtcttcct
ggaactccaggagagaagggcgagcctggattcccaggtctggatgggcttcctggtcag
ccaggacctcaaggagagagaggtttggatggccctgctggtccccctggtctgcctggt
cgctcaacacaaggtctgaagggagagcctggacgtttaggccagcctggtaatgatgga
cgtccaggactgaagggagatccaggtatgcctggacttgatggcctgcctggtataaag
ggtgaacctggacaatccactgatggtcttcctggactgaagggagaacctggacttcct
ggacgagctggcctgcctggagagcctggaccacgtggtaatgatggcctgtctggattg
cctggtctcaagggtgaccgtggacagcctggcttccccggagagcagggacgtgatggc
cttcctggtctaagtggatctaagggtaacgctggcttgcctggactccctggtatctct
ggtgataagggagatagtggtcttcctggtcttcctggactcctgggaccaaagggagat
cctggtctgcctggtctgcctggtctggatggagcaccaggtcaacctggtgcctttggt
ttgaagggagagcctggtttgcccggcgttgtgaattacgaacaacttcctaaaggagat
agaggattcaagggagatcctggtcttaatggtctcccaggcctttccggacccaaggga
gaacctggacgccctggatctcctggagtacctggtgaacctggtccaactggtctgcct
ggattcaagggagaacgtggtccccaaggtctgcggggtctggatggtctgcctggaact
gcaggaacaccaggtcagcgcggtcctagtggtttgcctggtgaccgaggtctacctgga
cgttccccacccactggcttcctgcttgtgcgacactcccagtctcagcaagtacccagc
tgcccaagaggtcaagcccagatgtgggatggttacagcttgctgtatattgaaggaaat
gaaaagtcacaccaccaggacctaggatgggccggctcctgcatgccacgtttcagcacc
atgcctttcttgttctgtaacgtggacaatgtctgcaactacgctagcagaaacgacagg
tcctactggctttcaacaactgctcctattcccatgatgcctgtagcagagggagaaatc
cggccatatatcagtcgctgtgttgtatgcgatgctcccgctaatgtgatcgctgtccac
agtcaaacactgcagataccagattgtcccaatggatggaatggactctggataggatac
agttttgctatgcatacagcagcaggccctggtggtggtggccagtctctctccagccct
ggcagttgtcttgaagacttccgagccactccattcattgaatgtaatggtgctcgtggc
acatgtcattactttgctaataaatacagcttctggctcactactatagaaatgaatgaa
caatttagttcaccacgttcacaaacacttaaagcaggaaacctccggactagagttagt
agatgtcaagtttgcatcaaaaatgtgtga
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integrated database retrieval system