Haliotis asinina (tropical abalone): 137283365
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Entry
137283365 CDS
T10448
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137283365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hasi03041
]
137283365
Enzymes [BR:
hasi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
137283365
Spliceosome [BR:
hasi03041
]
Complex A
U2 snRNP components
U2 related factors
137283365
Complex B
137283365
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
CdAMP_rec
DUF3928
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
137283365
NCBI-ProteinID:
XP_067670928
LinkDB
All DBs
Position
5:22337002..22362212
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AA seq
997 aa
AA seq
DB search
MPRDSRSYRRRSRSRSLSRERRRKRSRSRTPLRSRERDRLRRSRSRDRDRKRSRSRSRDR
DTKRDRRKRSRSKEKDRKREKKSKSRSPEKKAKSPSPSAEKVLHREGELRVKDEPLNKEE
EQKRLEVEMQKRRERIEKWRAERKKKQELLPINITPPMKKWTLEDDDEDEDEVVQENDKD
DENEVDPLDAFMQSVTEEVKSARDKDKTHDKGDNQKGANGNGAQAAAASGKVTFITAVAK
KKDDTSKEKGEVMESNIDAMEYSSEEEEEDLDTTMSNMAKKRKELTVVDHERIYYAPYRK
NFYVEVPEIARLTQEEVDQLREDMEGIKVRGKNCPKPVKSWAQCGVSKKIMDVLKKHQYE
KPTPIQAQAIPTIMSGRDLIGIAKTGSGKTLAFLLPMFRHVLDQPELEDEDGPIAVVMTP
TRELALQISSECKKFVRTMGLRCVCVYGGTGISEQIAELKRGCEIIVCTPGRMIDMLAAN
NGRVTNLRRCTYVVLDEADRMFDMGFEPQVMRIMDNIRPDRQTVMFSATFPRQMEALARR
ILTKPIEVQVGGRSVVCKDVEQHVIILEDDKKFLKLLELLGIYQEHGSVLVFVDKQENAD
ELMKELMRHSYPCLSLHGGIDQYDRDSTILDFKNGNIKLLIATSVAARGLDVKQLILVIN
YDVPNHYEDYVHRCGRTGRAGNKGFAYTFFTPDQERYAGDIIKALELSNAPVPQDLAQMW
NEYKERAKAEGRTIKSSSGFRGKGFKFDETEAQLADERKKLQKAALGLQDSDDEDAGMDI
DQKIEDMFASRKRVTDVAKPIANQQTQQQQSNQQKLELAKRLAARINMQRNLGPDAQDIT
QQAAAAILKGDSVAAPQVASKTIAEQMAEKIHAKIGYRPQAEEEKEQESAGETFKRYEEE
LDINDFPQTARWKVTSKEALAQICEYSEAGITVRGTYVPNDKDLKEGERKLYLAIEATSE
LAISKAKKEITRLIREELVRLQNCYIPNANKNRYKVL
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgcctagagatagcagatcctataggcggcggtcgcgatcaaggagtttatcccgtgag
cgcagaagaaagagaagcaggtctcgcacccctttaaggtccagggaaagagatcgatta
agacgttcacggtcacgagacagggatcggaagagatcaagaagcaggtcgagggatcgt
gatacaaagagagataggagaaaaagatccaggtcaaaagaaaaggataggaaacgagag
aagaagtccaaatccagatcccccgaaaagaaagcaaagagcccctctccgagtgctgaa
aaggttcttcacagagaaggagaactgagggttaaagatgaaccactcaataaggaagag
gaacaaaaacgtcttgaggtggagatgcagaaacgtcgtgaacgtatcgagaagtggcga
gcggagcgcaagaagaaacaggaactgttgcccataaacatcactcccccgatgaagaag
tggactctggaggatgatgatgaagatgaagatgaagttgttcaggagaatgataaggat
gatgaaaatgaggttgacccacttgatgccttcatgcagtctgtgacagaggaggtgaaa
tctgcccgtgacaaagacaagacccatgacaaaggtgacaatcagaagggagcaaatggt
aatggagcccaagcagcagctgcgagtggcaaagtgacgttcatcacagctgtggctaag
aagaaggacgacaccagcaaggaaaagggagaagtgatggagagcaacatagacgccatg
gagtattcatcagaagaggaagaggaggatctggacacaacaatgtccaacatggccaag
aaaaggaaggagctgacagttgtggaccatgagcgcatctactatgccccttacaggaag
aacttctacgtggaggtaccagagatagccaggctgacccaggaggaggttgatcagctg
cgagaagacatggaagggatcaaggtgcggggcaagaactgccccaaacctgtcaaaagc
tgggctcaatgtggagtcagcaagaaaatcatggatgtcctcaagaagcatcagtacgag
aagcccacacctattcaagctcaggcaatcccaactataatgtcaggtcgtgatctcata
gggattgccaagactggcagcggtaaaaccctggccttccttctccctatgttcagacat
gtactggatcagccagaactggaagacgaagatggacccatagccgtggtaatgacccca
acccgtgaactggctctacagatctcgtcggaatgcaagaaattcgtcagaactatggga
ttgagatgcgtgtgtgtgtacggcgggacaggaatatccgaacagatcgcagagttgaaa
agaggctgcgagataatcgtttgcacaccagggagaatgattgacatgctggcggcaaat
aatggacgtgttacaaacctgcgtcgttgtacgtatgtggttctagatgaggcagacaga
atgtttgacatgggatttgagccccaggtgatgagaataatggacaacatacggcctgac
cgtcagactgtcatgttttctgccaccttcccacgacagatggaggcattggcaagaaga
attctaaccaagccgatagaagttcaagttggaggtcgcagtgttgtgtgcaaagatgtt
gaacaacatgtcattatcctggaggatgacaagaagttcctgaagctgctggagctcctg
gggatctaccaggaacatggcagcgtcctggtgtttgtggacaagcaggagaatgcagat
gagctgatgaaggagttgatgcgccactcctacccatgtctgtctctacatggcggcatc
gaccagtacgatagggacagcactatcctggacttcaagaacgggaacatcaagcttctg
attgcaacatctgtggcagcaagaggcctggatgtgaagcagctgattctggtcataaac
tatgatgttccaaaccactacgaggactatgtacacagatgcggccggacaggtagagca
gggaacaaggggtttgcctacactttctttactcctgatcaggagaggtacgcaggggac
ataatcaaggcccttgagctgtctaatgctccagtgcctcaagacctggcacagatgtgg
aatgaatacaaggagagagcaaaggctgagggtcgaacaatcaagagttctagtgggttc
cgtgggaaagggttcaagtttgatgagacagaggcccagctggctgacgagcggaagaag
ctacagaaggcagcacttgggttgcaggactcggatgatgaggatgcaggcatggacatt
gatcagaagattgaagatatgttcgccagtcggaaacgtgtgacagatgtggccaagcct
atagccaatcaacagacacagcagcaacagagcaatcagcagaaactggagctggccaaa
cgtttggctgctcgtatcaacatgcagcgcaacctgggacctgacgcccaggatattacc
cagcaggcagcagcagctatattgaagggagattcggtagctgctccacaagttgcttcc
aagacaattgcagagcagatggcagagaagattcatgcaaagattgggtaccgaccacag
gctgaggaggagaaagagcaggaatcggcgggcgagactttcaaacgctatgaggaagag
ttagacatcaatgacttcccacagacagccagatggaaggtcacatccaaggaagctctg
gctcagatctgtgagtattcagaggctggcatcacagtgagaggaacttatgtgcccaat
gacaaggatctgaaggagggagagcggaagctgtacctggctattgaggctacaagtgaa
cttgccatctccaaggccaaaaaggagattacacgcctcataagggaggagctcgtcaga
ctgcaaaattgttatattccaaatgccaacaagaatcgctacaaagtgctgtaa
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