Haliotis asinina (tropical abalone): 137283783
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Entry
137283783 CDS
T10448
Name
(RefSeq) pre-mRNA-splicing factor RBM22-like isoform X1
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
137283783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hasi03041
]
137283783
Spliceosome [BR:
hasi03041
]
Complex B
Other components
Prp19-related factors
137283783
Complex C
137283783
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
zf-CCCH_RBM22
RRM_1
RRM_YTH1
zf_CCCH_4
Torus
RRM_occluded
zf-CCCH_2
zf-CCCH
Nup35_RRM_2
zf-CCCH_4
RRM_3
RRM_PARP14_3
O-antigen_lig
zf-CCCH_PARP12
Motif
Other DBs
NCBI-GeneID:
137283783
NCBI-ProteinID:
XP_067671567
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All DBs
Position
5:complement(14874646..14884626)
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AA seq
451 aa
AA seq
DB search
MATSKGANTYNRQNWEDAEFPILCQTCLGDNPYIRMTKEKYGKECKICARPFTVFRWCPG
ARMRFKKTEVCQTCSKIKNVCQTCLLDLEYGLPVQVRDAALKAYDNMPKSDVNKEYYTQN
MEREIANSDGTSPVGALAGKAQAPSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEEC
PYRHEKPTDPDDPLADQNIKDRFYGMNDPVADKLMNRYSNMPKLEPPEDKTITTLYVGNL
GDKVTEQDLRDHFYQFGEIRSVNVVSKQQCAFVQFTERPSSETAAERSFNKLIINGRRLN
IKWGRSQGQQQLTGKKEEDGQMLEPVPGLPGALPPPPEELGNNFFNLQGPPPALPPLPPR
GMMPRGPPPMPPFGIMPRGPPPMGMRMPPPPPGIMPIRPPPGVHMRHMVHYPSQDPTRMG
AVSSGKQPQQQQQQQQQQQQQQPPPQQQQPT
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgtccaagggagcaaatacgtacaatcgtcaaaattgggaagatgctgaattc
ccaattttatgccaaacttgtcttggggacaatccatacattcgaatgaccaaagaaaaa
tatggcaaggaatgtaagatctgtgccagacctttcaccgttttccgatggtgtcctggt
gctcgtatgcgtttcaagaagacagaagtctgtcagacctgcagcaaaataaagaatgtc
tgtcagacatgtctcctggacttggagtatggacttcctgtccaggttagagatgcagct
cttaaagcttatgacaacatgcccaagtcggacgtcaacaaggaatactacacacagaat
atggaacgagaaattgccaacagtgatggcaccagccctgtaggggcacttgcagggaag
gctcaggcgccaagtgatatgctactgaagctggccaggaccacaccctactataaaagg
aataggccgcacatctgctcattctgggtcaagggggagtgcaagagaggagaggagtgt
ccataccgtcatgagaaacccactgatccagatgatccactggctgaccagaacattaag
gaccgattctacggcatgaacgaccctgtggcagacaagttaatgaacagatactccaac
atgcccaaactggaacctccagaggataagactatcacaaccttgtacgtgggtaacctt
ggtgacaaggtgacggagcaggatctcagagatcacttctaccagttcggtgagataagg
tctgtgaatgttgtctcaaaacagcagtgtgcatttgtccagttcacggaaaggccatcg
tctgagactgcagctgagaggtcgtttaataagctcatcatcaatggtcgccggctgaac
ataaagtggggtcggtcacagggccagcaacaactgaccggcaagaaggaggaggatggt
cagatgctggagccagtgccaggtctcccaggagcactaccacccccaccagaggagctg
ggcaacaacttcttcaacctccagggccctcctccagctctgccacccctgccacccagg
gggatgatgccccgtgggcccccacctatgcctccatttggtatcatgccaagagggcca
ccgcctatgggtatgcgcatgcctccccctcccccaggtatcatgcccatcaggcctccc
cccggggtacacatgaggcatatggtgcactatccatctcaagaccccacgcggatgggg
gcagtgtcgtcagggaaacagccacagcaacagcagcaacagcaacagcagcagcagcag
caacagcctcctccacagcagcaacaaccgacttag
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