Haliotis asinina (tropical abalone): 137284307
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Entry
137284307 CDS
T10448
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
137284307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hasi03019
]
137284307
Enzymes [BR:
hasi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
137284307
Messenger RNA biogenesis [BR:
hasi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
137284307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
R3H
EVC2_like
Motif
Other DBs
NCBI-GeneID:
137284307
NCBI-ProteinID:
XP_067672175
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All DBs
Position
5:complement(37590692..37612034)
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AA seq
600 aa
AA seq
DB search
MEVTKANFKECLSQIEEAISEADFLAIDGEFTGLHAKDAESIGSFDTPEERYHKLRKGAA
QFLLVQFGLAAFKYDPETKSYTARPFNMYVFPRPFSRQAPDRRFLCQASSIDFLVSQNFD
FNKLFREGISYLTLPQEEHLKESIKKRNAEHTQLSSPAFTSPHGASAGPNKGPVEVPDDQ
KDFIDNICEQIKDYIAKATKEPLQLPQCSAFQRKLIYQTARLKYSNIHLETKIGEKKERY
IVVSAVESEQDLRDKEKAKMDAEMAEVDEAIGFCKITRMLSQSGKLVVGHNMLLDLIHVI
NQFNFPLPEEYDEFKAMLKCCLPRLLDTKLMASTAPFKDLIINTTLGDLRRTVEAKPFVK
PQVDLPEEFSKYSAETEFLHEAGYDAYITGIAFIGMANFLGTFQQPPEDWISPQSPLIEP
FVNKLFMMRVYDIPYLNLTGPDVVPVREHVFHVTFPKEWKSHDIVSLFAPYGGVSLSWIN
ETSAFAALFRKDNAPAAVKGLVNGEDNSVKVMTYEDFKKHGATSQYSLMPRKRKHTSDDA
ENSKKPRISPAAESTTGPEGDEVKEEDVVKEKMETNSGCESPDSCSDKKAKKMFEEPEVW
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcaccaaagcgaactttaaggagtgcttaagtcaaatagaagaagctatcagt
gaagcagatttccttgctattgatggagaatttacaggacttcatgctaaggatgctgag
tcaattggatcatttgatactcctgaagagagataccacaagctgagaaagggtgcagca
cagtttctactggtacagtttggcctagccgcatttaaatatgatccagagacaaaaagt
tacacagcccgaccattcaacatgtatgtattcccacgtccattcagccgccaggctcca
gatcgacgatttctgtgtcaggcttcaagtattgacttccttgtgtctcagaattttgat
tttaacaagttgtttagagaaggtatatcctacttgaccctgccacaagaagaacacctg
aaggagtcaatcaagaagaggaatgctgagcacacccagctgtcatctccagccttcacc
agtccccatggggccagtgctgggcccaacaaggggccagtagaggtccctgatgatcag
aaggacttcattgacaatatctgtgaacaaatcaaggactacatcgccaaggcaaccaag
gagccccttcaattgccccagtgttctgcattccagaggaaactcatttaccagacagcc
aggctgaagtactccaacatccacctggagacaaagattggggagaagaaggagcgctac
attgtggtgtcggctgtggagagtgagcaggacctgagggacaaggagaaggccaagatg
gatgctgagatggccgaggtggatgaagctattggtttctgtaaaatcacacggatgctg
tcacagtctggcaagttggttgtcggacacaacatgttgttggatctcatccatgtcatc
aaccagttcaacttccccctcccagaggaatatgacgagttcaaggcaatgttgaaatgt
tgccttccaagattgctggatacaaaactgatggccagtacagctccgttcaaggatctc
atcatcaacacaacattaggagatttacgcaggactgttgaagctaaaccttttgtaaag
ccgcaggttgatctaccagaggagttttccaaatacagtgcagagacagagtttctgcat
gaggcaggctacgatgcatacatcactggaattgctttcattggcatggccaactttctt
ggtacattccagcagccgcccgaagactggatctctccacagtcacctctcatcgagcct
tttgtcaataagctgttcatgatgagggtttatgacatcccctatctcaacctgactgga
ccagatgtggtcccagtgagagagcatgtgtttcatgtcacattccctaaggagtggaag
tcacatgacattgtcagcctttttgctccatatggtggcgtctccctgtcatggatcaat
gaaacttcagcctttgctgcgctgttcaggaaagacaatgctcctgcagctgtcaaaggc
ctggtgaacggagaagacaattctgtgaaggtaatgacatacgaggacttcaagaaacat
ggagcaacctcacaatattctctgatgccacggaaacgcaaacacacatctgatgatgca
gaaaattcaaagaagcccaggatatctccagctgcagagtcgacaacaggtccggagggg
gatgaagtaaaggaggaggatgtggtgaaggagaagatggagacaaactctggatgtgag
tcaccagattcctgcagcgacaagaaagccaagaagatgtttgaggagcctgaggtgtgg
tag
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