Haliotis asinina (tropical abalone): 137284651
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Entry
137284651 CDS
T10448
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03030
DNA replication
hasi03410
Base excision repair
hasi03420
Nucleotide excision repair
hasi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
137284651
03410 Base excision repair
137284651
03420 Nucleotide excision repair
137284651
03430 Mismatch repair
137284651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hasi03032
]
137284651
03036 Chromosome and associated proteins [BR:
hasi03036
]
137284651
03400 DNA repair and recombination proteins [BR:
hasi03400
]
137284651
DNA replication proteins [BR:
hasi03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
137284651
DNA Replication Termination Factors
ELG1-RFC complex
137284651
Chromosome and associated proteins [BR:
hasi03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
137284651
DNA repair and recombination proteins [BR:
hasi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
137284651
Check point factors
HRAD17(Rad24)-RFC complex
137284651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
AAA_16
AAA_14
AAA_24
Rad17
Viral_helicase1
AAA_11
Mg_chelatase
AAA_19
nSTAND3
RuvB_N
AAA_18
MipZ
AAA_assoc_2
AAA_5
AAA_25
ABC_tran
DNAX_ATPase_lid
AAA_28
Gp44_lid
AAA_30
SLFN-g3_helicase
bpMoxR
RNA_helicase
MeaB
NTPase_1
AAA_23
DUF815
FtsK_SpoIIIE
AAA_3
Motif
Other DBs
NCBI-GeneID:
137284651
NCBI-ProteinID:
XP_067672650
LinkDB
All DBs
Position
1:95521957..95527338
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AA seq
351 aa
AA seq
DB search
MAGVEAMEVEAVTTPVKPAKENVKSTGYEMPWVEKYRPIKLHEIVGNEETISRLSVFAKE
GNVPNVIIAGPPGTGKTTSILCLARALLGTSFRDAVLELNASNDRGIDVVRNKIKMFAQQ
KVTLPKGRHKVIILDEADSMTEGAQQALRRTMEIYSKTTRFALACNSSEKIIEPIQSRCA
VLRYSKLSDGQLLARLLEVCDKEGVSFNDEGLEAIIFTAQGDMRQAINNLQSTFQGFGHV
NTENVFKVCDEPHPVTIKHMLEQCVLGNLDEAYKMMAHLWGLGYSPHDIITIIFRVCKNQ
NMPEFLKLEFIKEIGYTHMRIVEGVDSLLQMAGMLARLCKLSAAPGTTAGQ
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgtggaagcaatggaagtggaggcagtgacaactccagtgaaacctgccaaa
gaaaatgtcaaatcaactggttatgagatgccctgggtagaaaagtaccgacccatcaaa
ctacatgaaattgtcggaaacgaagagacaatcagcagactgtctgtatttgcaaaggaa
ggaaacgtgccaaacgtcattattgcaggtcccccaggaacagggaagacaacaagtatc
ctgtgtctggccagagctctgctggggacatcgtttagagatgctgtgctggaactcaat
gcttcaaatgacagaggtattgacgtagtcagaaataagatcaagatgtttgcgcagcag
aaggtcacactacccaagggaagacacaaagtcatcatactggatgaagctgacagtatg
acagagggagcccagcaggccttgaggagaaccatggagatctactcaaagacaaccaga
tttgcgctggcctgtaactcatcggaaaaaataatagaaccaattcagtctcggtgtgct
gtgttacgctactccaagttgtctgacggccaactgttggcacgtctgctggaggtgtgt
gacaaggagggagtgagtttcaatgatgagggactggaagccatcatcttcactgcccag
ggagacatgaggcaggcaatcaacaatttacaatcaacattccagggatttggccacgta
aatacagaaaatgtgtttaaggtttgtgatgagcctcacccagtgactatcaagcacatg
ctggagcaatgtgtgttaggtaacctggatgaggcgtacaagatgatggcacacctgtgg
gggctggggtactctccccatgacatcatcaccatcatctttagagtctgcaaaaaccag
aacatgcccgagtttctcaaacttgagttcatcaaagagatcggctacacccacatgagg
atagtggagggagtggactctctgcttcagatggcaggcatgctggccaggctgtgtaaa
ttatctgcagctccagggacgacagccggacagtga
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