Haliotis asinina (tropical abalone): 137286301
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Entry
137286301 CDS
T10448
Name
(RefSeq) cleavage stimulation factor subunit 2-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137286301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hasi03019
]
137286301
Messenger RNA biogenesis [BR:
hasi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
137286301
U7-dependent histone pre-mRNA processing factors
137286301
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
DUF8400
RRM_occluded
RRM_7
RRM_Rrp7
RRM_MUD2_C
Motif
Other DBs
NCBI-GeneID:
137286301
NCBI-ProteinID:
XP_067674179
LinkDB
All DBs
Position
6:complement(62682735..62693759)
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AA seq
419 aa
AA seq
DB search
MANIMNQMNPPMTAAERAQRSVFVGNIPYETTEEQLKEIFAQAGPVVSFRLVYDRETGKP
KGYGFCEYQDVETAQSAMRNLNNYDFNGRPLRVGVAAGEQNKEEMKGMQQALGGPPIESP
YGEPVEPEKAPEAISKAVASLPPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQ
AQIVMKIVDPQVALAMLYRDANQVPPSTGAANNGQPSTSAPNQMGPPQGGRGPAPGQGPG
GSRGMGGPSGDMMGASRGPMPGMGGPMGGPMPGGHRDMGGPYPGQPQRSEFRDQRMMGDP
RGMPQHQAGPAMQGGHGGQGASMRPQMVPAPQQAPMQSALGALGALGNLGNLGQLSAGVM
SGLGGGLGGPGTQISPQDQEKAALIMQVLQLTDQQISMLPPEQRQSIIILKDQIAKSAQ
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatattatgaaccagatgaatccgccgatgacggcagctgagagagctcagcga
tcagtgtttgttggcaacattccatatgaaaccacagaagaacaactgaaggagatcttt
gcccaggcaggaccggttgtcagtttcagattggtgtatgacagggagacagggaaaccg
aagggttatggcttctgtgagtaccaggatgtggagacagctcagagtgccatgagaaac
ctgaacaactatgacttcaatgggcgaccactacgtgttggtgtcgcagcaggggaacag
aacaaggaggagatgaaagggatgcaacaggcccttggggggccgccgattgaaagtcct
tatggagagccagtggaaccagagaaggctcctgaagctatatcaaaggctgtggccagt
cttccacccgaacagatgtttgaacttatgaaacaaatgaagttatgtatccaaaacaac
ccaaacgaagccaggaacatgcttctacagaatcctcagttggcctacgctttgctgcag
gctcagattgtcatgaagatagttgacccacaagtagcactggccatgctgtaccgtgac
gccaaccaggtgccgcccagtaccggcgctgctaacaatggacagccttccacctcagct
cctaaccagatgggacctccccaaggtggacgaggtcctgctccaggacagggccctggg
gggtcacgtggcatgggtggtccatcaggggacatgatgggtgcctccagaggaccaatg
ccaggtatgggtggtccaatgggtggtccaatgccaggaggtcatcgtgacatgggggga
ccctaccctggtcagccacagagatcagagttccgtgatcagaggatgatgggggatccg
cggggcatgccgcagcaccaagcaggaccagccatgcagggaggacatggaggacaagga
gcgtccatgagaccacagatggttcctgctccacagcaggcaccaatgcagtcagccttg
ggtgctttaggtgcattaggtaacctaggcaaccttggccagctgtccgcaggagtgatg
tctggtctgggtggtggacttggaggaccggggactcagatctccccacaggaccaggag
aaggctgccctcatcatgcaggtgttgcagctgaccgaccagcaaatctccatgctgccg
ccagagcagaggcagagcatcatcattctcaaggaccagattgccaaaagtgcccagtag
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