Haliotis asinina (tropical abalone): 137287066
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Entry
137287066 CDS
T10448
Name
(RefSeq) DNA repair nuclease APEX1-like isoform X1
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
137287066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hasi03400
]
137287066
Enzymes [BR:
hasi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
137287066
DNA repair and recombination proteins [BR:
hasi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
137287066
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
137287066
NCBI-ProteinID:
XP_067675283
LinkDB
All DBs
Position
6:complement(60837135..60848805)
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AA seq
378 aa
AA seq
DB search
MPPKSKKKAAKEVVDADAAAAEEPPAKKTKKGKKDEADEEPPAKKTKKGKKDEADEEPPA
KKTKKGKKDEADEGEEATPKKGKGKKKDEENGDGDNKKVVIPTLTLDEQDFSSSAKTKDG
LDWNLKISSWNINGIRAWLGKEGTAYISKEAPDIFCVQETKCSLEKMPDTVNVDGYHAYW
SSGDAEGYAGTGMYCKKKPIEVMYGIGVGKHDKEGRVITAEFEKFYMVTAYIPNSGRGLT
RLNYRTKEWDVAFQDYMKKLDAKKPVILCGDLNVAHLDIDLKNPKTNKKTAGFTPQEREG
FTNLLNEGFVDSFRLLYPEQEGAYTFWAYFMNNRAKDVGWRLDYFVISERLKDTLCDSII
RKFVQGSDHCPIVLLLNL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgcccccaaagtcaaagaaaaaggctgccaaggaagtggtcgatgctgatgctgctgca
gctgaggaacctccagcaaagaagacaaagaaaggaaagaaggatgaggctgatgaggaa
cctccagcaaagaagacaaagaaaggaaagaaggatgaggctgatgaggaacctccagca
aagaagacaaagaaaggaaagaaggatgaggctgatgagggtgaggaggccacacccaag
aagggaaaagggaagaagaaggatgaggagaacggagatggagacaataaaaaggttgta
attccaaccctgaccttggatgagcaggacttctcttctagtgcaaagaccaaagatggt
cttgactggaacttgaagatatcctcctggaatatcaatggaatcagggcgtggcttggg
aaagagggtactgcatacatcagtaaggaggctccagatattttctgtgtgcaagagaca
aagtgcagcttagagaagatgcctgatacagtcaatgttgatggttaccatgcttactgg
tcgtcaggggatgctgagggatatgctgggacaggcatgtattgcaagaagaagccaatt
gaggtcatgtatggaattggtgttggcaaacacgacaaggagggacgtgtcatcacagcc
gagtttgaaaagttctacatggttacagcatacattccgaactctggacgtggtttgaca
cgacttaactaccgcacaaaggaatgggatgtggctttccaggactacatgaagaagctg
gatgccaaaaaaccggtgattctgtgtggagatctcaacgtcgcacatcttgacatagac
ttaaaaaatcccaaaaccaacaagaaaactgcaggttttactcctcaggagcgtgagggg
ttcaccaacctgctgaatgagggctttgtggactctttccgcctcctgtacccggaacaa
gaaggtgcctacacattctgggcctacttcatgaacaacagagctaaggatgttggctgg
agattggactatttcgtgatatcagagcgtctgaaggacaccctttgtgacagcatcatc
aggaagtttgtgcagggtagtgaccattgtccaatcgttctgctcctcaacctttaa
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