Haliotis asinina (tropical abalone): 137288248
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Entry
137288248 CDS
T10448
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
137288248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hasi03400
]
137288248
DNA repair and recombination proteins [BR:
hasi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
137288248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
137288248
NCBI-ProteinID:
XP_067676811
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All DBs
Position
6:58871167..58896768
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AA seq
931 aa
AA seq
DB search
MALLPKQDLQLDTAQEQGFLSFFRGLPEKSSTTLRVFDRTEYYTVHGQDALFVAKDVFKT
TGVVKHLGAGSNKVESVVLSKMNFESLVRNLLLVRQYRVEVYCNKGAAKNNDWSLAFKAS
PGNLTQFEDILFGNTEMSASSGVVGVKLGTDNGQRVVGVGFTDVTQRKFTVSEFTDNDQF
SNLEALIVQLGPKECVVMAGETTGEGGRLRQVLERSGLLLTERKRADFSSKDIVQDLNRL
LKVKKGEQPNSSTLSELDKTHGTAALSAVIRYLELLSDEGNFGQYTVGSFELGQYMRLDS
AAVRALNLMPSPNEGGNKNQSVLGLLNKCRTAQGQRLLGQWVKQPLMDVNRIEERLNVVE
AVVEDAELRQTLQEDQLRRMPDFQRLAKKFQRQKATLQDCYRVYQAIDKMPQLLETLERH
SGTHQPLLMELFTNPLKELLMDFSKFQEMVETTLDLKQVEDHEYLIKPDFDENLTALREK
IDDLEGQIKGQMNRVARDLGLEANKTLKLESNSQLGYFFRVTRKDEKSLRNNKNYRTIDT
NKNGVRFHNTAVRQLNEEYLQAKEEYAEQQKSVVAEIINIAAGYVDPMLLINDNIAQLDV
LVSFAHVACSAPIPYVRPTIHAKGGAALRLTEARHPCLEMQDDVSYIPNDVAFIRDKEMF
HIITGPNMGGKSTYIRSIGVIVLMAQLGCFVPCEEAEISVVDSILARVGAGDSQLKGVST
FMAEMLETASILRSASENSLIIIDELGRGTSTYDGFGLAWAISENIATKIKAFCLFATHF
HELTALADVVPTVTNRHVTALTTNDTLTLLYRVKPGVCDQSFGIHVAELAHFPKHVIEFA
KAKASELEDYQSISLTGTDLDGDSEPAVKKRKCAKQDGEQLIQDFISKVKKIPVSTLSDD
EILEEVGKLKAELEAKDNPYIKDLLAQKQKT
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggccttgctaccgaaacaggacttacagttagacacagcccaggaacagggattcctg
tctttcttcagaggattgccagagaaatccagtactacgttgcgtgtgtttgacaggaca
gaatattacaccgtccatggacaggatgcactttttgttgccaaggatgtgttcaagacc
accggggttgttaagcatctgggagcaggatcaaacaaggtggagtctgtggtccttagc
aaaatgaactttgagtcattggtgcgcaacctgctgctggtccggcagtacagagtggaa
gtatactgcaataaaggagctgctaagaacaatgactggtccctggcctttaaggcatct
ccaggtaatctgactcagtttgaggacatcttgtttggcaacactgaaatgtcagcttcc
tctggtgtcgtgggtgtgaagctgggtacagacaatgggcagcgggttgtgggggtcggc
tttacagatgtcactcagaggaagttcactgtgagtgagtttactgacaatgaccagttt
tcaaatcttgaggctctgattgttcaactgggcccgaaggagtgtgtggtaatggcaggg
gagacaactggagagggaggtcgactgaggcaggtgcttgagagaagtgggttactactc
acagagagaaaaagagctgacttctccagcaaggacattgttcaagacctgaaccgactc
ttgaaggtgaagaagggagaacagccaaacagctcaactctcagtgagcttgacaagacg
catggtactgcagctctctctgccgtcatacggtacctcgagctgctgtctgacgagggc
aactttggtcaatacactgtgggtagttttgagttgggtcagtatatgagactggactca
gcagctgtgagggccctcaacttgatgcccagtcccaatgaaggtggcaacaagaaccag
agtgttctgggtctgctcaacaagtgccggacagcccagggtcagcgtctcttgggtcag
tgggtcaagcagcccctcatggacgtcaacaggatagaggagcgtctcaatgttgtggag
gctgttgttgaggatgcggaactgcggcagacactgcaagaagatcagctccgtcgcatg
ccagacttccagcgtctggccaagaagttccagcgccagaaggccacactacaggactgc
tatcgagtgtaccaggcgattgacaagatgccacagttgctggagaccttagaacgccac
tctggcactcatcagccactcctcatggaactcttcactaacccactcaaggaactgctg
atggacttctccaagttccaggagatggtagagacaacattggacttgaagcaagtggag
gaccacgagtacctcatcaaaccagactttgacgagaacctcacagctctccgtgagaag
attgatgacttggagggccagatcaagggacaaatgaatagggttgccagagatctgggt
ctggaagcaaacaagactctcaagctggagagcaactctcagcttggctacttcttcaga
gtgacaaggaaagacgagaagtctctgcgcaacaacaagaactaccgcactattgacacc
aacaagaatggtgttcggtttcacaatactgcagtgcgtcagttgaatgaagaatacctc
caagccaaggaagaatacgcagaacaacagaagagcgtagtcgcggagatcatcaacatc
gcagctggctatgtagatcccatgctgctaatcaacgataacattgcccagctggacgtc
ctcgtcagcttcgcacacgtcgcctgcagtgcccctatcccttacgtgaggccgactata
catgcgaaaggtggggctgcactgcgtctgacggaggcacgacacccatgtctggagatg
caggatgatgtgtcgtatatccccaatgatgtcgccttcattagagacaaagaaatgttt
cacatcataacaggtccgaacatgggaggaaagtccacgtacatcagatcgataggtgtc
attgtgttgatggcccagttgggatgctttgtcccatgtgaggaggccgagatttctgta
gtggacagtatcctggcacgtgtgggtgcgggtgacagtcagctgaagggtgtgtccacc
ttcatggcggagatgctggagactgcgtctatactgaggtcagcatcagagaactcacta
ataatcatcgatgaactgggacgtggtacatcaacatatgatggctttggtctggcatgg
gcaatctcagagaacattgcaacaaagattaaggcattctgcttgtttgcaacacacttc
catgagttgactgcgctagccgatgtcgtcccaactgtgaccaaccgtcatgtgactgcg
ctcaccactaatgacaccctaacactgctgtacagagtcaagcctggtgtatgtgaccag
agtttcggaatccacgtggcagagctggcccacttcccaaagcatgtgatagagtttgcc
aaggcaaaggccagtgagcttgaagactaccagtctatcagcctgaccggcactgacctg
gatggagactcagaaccagctgtcaagaaacgcaaatgtgccaagcaggatggagaacag
ttgatacaggacttcatcagcaaggtcaagaagattcctgtatcaaccctgagtgatgat
gagatcctggaggaggtgggaaaactgaaggcggaattggaagccaaggacaacccatac
atcaaagacctcttggcgcagaaacagaaaacatag
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