Haliotis asinina (tropical abalone): 137293501
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Entry
137293501 CDS
T10448
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2-like
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
137293501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hasi03019
]
137293501
Messenger RNA biogenesis [BR:
hasi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
137293501
U7-dependent histone pre-mRNA processing factors
137293501
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Anti-Pycsar_Apyc1
Lactamase_B_2
MBL_MAP1B
LIAS_N
Motif
Other DBs
NCBI-GeneID:
137293501
NCBI-ProteinID:
XP_067680176
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Position
8:complement(13133839..13318845)
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AA seq
761 aa
AA seq
DB search
MTSIIKLHVFSGAQGETPPCYMLQVDEFRFLLDCGWDEDYNMDHIRELKRHLHQIDAVLL
SYPDQQHLGAVPYLVGKAGLSCPIYSTIPVYKMGQMFMYDLFQSRHNTEEFDVFTLDDVD
AAFDKIIQLKYSQTITLKGKGHGLQITPLAAGHMIGGTIWKIVKDGEEEIVYAVDYNHKK
ERHLNGCVLEMFNKPSLMITDSFNATYNQPRRRLRDEQLMTTILQTMRNDGNVLVAVDTA
GRMLELAQLLDQMWRSAESGLSPYSLALLNNVSFNVVEFAKSQVEWMSDKIMRAFEDNRS
NPFQFKHLKLCHNLGELARVPEPKVVLASTPDLQCGFSRDLFTAWCTNAKNSIILTNRTS
PGTLARWLIDNQQNKTVTMEVRRRIQLDGPELEDYMKKKQEKKAQERLKKTELSKLDLAD
ESSDESEAEMEVEAYGNKPGKGKHDLMIQGEGKQRSGFFKQAKKSYPMYPFHEEKIKWDE
YGEIIRLEDYTILDVVAPDEDIATNETATADDTMQDVSDVPTKCISSNVTLDINASVLYI
DFEGRSDGESVRKILSQIKPKQLVLVRGSAEATDALADYCKSQSIVQGNIFTPRVGEVID
ATTESHIYQLRMRDHLVTSLMFSKARDIELAWIDGYLNMSSDKTDIGAMYDIEEGDAIDQ
EKRKALEEDKEAQDLIPTLESFPPTQVPVHTSVFINEPKLSDFKMVLLQEGIPCEFVAGV
LICNNTVAVRRNEAGRIQLEGALCDDYYVIRDLLYQQYAIV
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaattatcaagctgcatgtattctctggggctcagggggaaaccccaccctgc
tacatgctgcaggttgatgagttccgcttcctgctggactgtggctgggacgaagactac
aacatggatcatatccgagaactcaaacgtcaccttcaccagatagatgcagtgctattg
tcatatcctgatcagcagcatttgggtgcagtcccatatcttgtgggcaaagctggtctc
tcctgccccatatattcaactattccagtgtacaagatggggcaaatgtttatgtatgat
ctgttccagtctcgtcacaacacagaagaatttgatgtatttacactggacgatgttgat
gctgcctttgacaagatcattcagctgaagtactcacaaactataacactcaaaggcaaa
ggccatggtctgcagataacgccccttgctgcaggacacatgattggaggcacgatatgg
aagattgtgaaggatggggaggaggagatcgtgtatgctgtggactacaaccacaagaag
gaaagacatttgaatggctgtgtgctggagatgttcaacaagccatcgctgatgatcact
gattctttcaatgcaacatacaaccagccaaggagacggctaagagacgaacagctcatg
acaaccatcctacaaactatgaggaatgatgggaacgttctggttgctgtggatacggca
ggaagaatgctggaacttgctcagttactggatcaaatgtggaggagtgctgagtctggc
ctctcaccctactccttggctctcctcaacaacgtcagcttcaatgttgtggagtttgcc
aaatcacaggttgaatggatgagtgacaagatcatgagagcatttgaagacaaccgaagt
aacccattccaattcaagcacctcaaactttgccacaacctgggagaattggctcgagtt
ccagaaccaaaggtagtccttgcaagcaccccagatctacagtgtggcttctcgagagac
ttgttcacagcatggtgtaccaatgccaaaaacagtatcatcctgaccaacagaacctct
cccgggactctggcaagatggctgatagacaaccagcagaacaagactgtcactatggag
gtgagacgacggatccaattggatggaccagaactggaagattacatgaagaagaaacag
gagaagaaagctcaagaaagactcaagaagacagagctgtctaagctggatttggctgat
gaatcaagtgatgagagtgaggcagagatggaggtagaggcctatggcaacaaacctgga
aagggcaaacatgacctcatgattcaaggggagggaaagcaaaggagtggcttcttcaag
caagccaaaaagtcctaccccatgtatccattccatgaagaaaagattaaatgggacgag
tatggagaaatcatcaggctggaagattacacaatacttgatgtggtggcgcctgacgaa
gacatagcaactaatgagacagcaacagctgatgacacgatgcaagatgtctctgatgtt
cccaccaaatgcatctcttccaatgtgacacttgatatcaatgccagtgttctgtacata
gactttgagggcagatctgatggagaatcagtccgcaaaatactcagtcaaatcaaacca
aaacaactggttctggtgcgagggtcagcagaggcaactgatgcactagcagactactgc
aagtcccagtcaatagtccagggcaacatcttcacacccagggtaggggaggtgattgac
gccaccacagaaagtcacatctaccagctgaggatgagggaccacctggtcacctccctg
atgttttccaaggccagagatatagagctggcctggatagatggctatctcaatatgtcc
agtgacaagacagatataggtgctatgtatgatattgaggaaggtgatgccattgaccaa
gagaaacgcaaagctttagaagaagacaaagaagctcaggatctgatccctacactggaa
tcctttccaccaacacaggtcccagtgcacacatctgtgttcatcaatgagcccaagttg
tcagacttcaagatggtgctgcttcaagaaggaatcccttgcgagtttgtggctggtgtg
ctcatctgtaacaacactgtggcagtcaggaggaatgaggctgggaggatacagctagag
ggtgctctctgtgacgactactacgttatccgggatctcttgtatcagcagtatgctatt
gtgtga
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