Haliotis asinina (tropical abalone): 137293662
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Entry
137293662 CDS
T10448
Name
(RefSeq) nuclear exosome regulator NRDE2-like
KO
K26109
nuclear exosome regulator NRDE2
Organism
hasi Haliotis asinina (tropical abalone)
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hasi03019
]
137293662
Messenger RNA biogenesis [BR:
hasi03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
137293662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NRDE-2
TPR_14
HAT_Syf1_CNRKL1_N
TPR_15
DUF6602
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
137293662
NCBI-ProteinID:
XP_067680449
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All DBs
Position
8:complement(66357720..66380271)
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AA seq
1167 aa
AA seq
DB search
MDAEETIHDDLKTSSPSQTLSPLSSATVKNYETHTLFPVGSSHNASHTEDTEDGDLDWLH
NPSYGAAAVASVVELQEAITVYNASAKSGNQCTLSPREPSEGGGSDESQGIAEPVDEGPA
SQKRKKAKHKHKHKKTKVKRKEPMVSSRIQSHLPEKVSVSTKKVFIEEMIGLEPEDAFRI
DRQRDKDLWTYECLYKGHIAGYKRLGHSVLGVQGNLDIFKHEKNSSKKAEPMRYCHKRSR
ALLRKVGVKVRHVDGEAAQVQYIPLVGVTDTAADPLWVLDEATRQYVQGRGTDEGAAQEE
MQSDDEILQQVATYNKRLRDDTQNVKLWLEFVKFQDKVFSGVGDSWQGGGLSKAVIDKKL
AILSRALSDNPGSIDLKLAQLEVCKDVWDGAQLAREWDQLLFVHSANTKLWHSYLMFQQS
RLTSFSVSKLIKLYHKCFRVLTAVVEGNMKTARPADVPDSNLMGVFVQYCMFLHQVGYTE
RAVASYQALIEFNVFCPSSLTDTSTADRAGVFESFWDSSVPRFGEPGAAGWAAWRCRDKM
SAETPVVTADPTEEAEDDVIAKQIPQWQTWLEIETVRENAHWLPWRPDILKNETEEDCED
LERLVLVDDITPVLFKVSEPNAQFRLVMCLLDQLGVATRDVLSQLCLQEQDGISVSSIQL
NLHKMSQLPGLPAARSPDLDGAANQSETLQRFIHQILSQAVHVFSGQSQTVFTLLLIQNE
WRKHGVDSPRNLPRHISKELRKFVKNLLKEGHNRNNLTVWNAYACLEHDLGKSQEAMGVL
ETALAMFSGGSSEDKSGLCLLYQTYCQLLLNITQPFHADLTQKQMDVSQKQKTRLLFCLM
SLAEGTKFKVEKEPMMTTSSILRTQRKIKTKVTHLARTICEAKSPQGEGDTKVFHQLLSE
LNCLAMFDLCSIGLKAAMSNYQDVLLLLDGCKCSARCQALLAVRENIFRSQWILLCHQMS
ISAVPLSQLRVVIDRALDEFPNNSSFLQCLVDLESRSHIVGRIRRYMDRALVNPSSPLPL
IHSVLVEVGRLTSLHEESHTVCNSGVMHRVRGLLERGTRNSASQHCPLVWRLYCHVESKY
GDRERARGILYQALQQCPWVKVLYKDGVCLFGQSQLQEMVDLMTEKELRVQIPLEELDLL
AQSDPVPQVEETLLDHSPQEEEDLKKV
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggaggaaacgattcacgatgacttaaagacaagctccccatctcagactctg
tccccgttgtccagtgcaactgtaaagaattatgagacgcatacactttttcccgtgggc
agcagtcataatgcctctcacactgaagacacagaagatggggacctggactggcttcac
aacccaagttatggggctgctgctgtagcatcagtagtggagctccaagaggccatcaca
gtgtacaatgccagcgccaagtcaggaaaccaatgtactctctcaccgagggagccaagt
gaaggaggtggcagtgatgagtcccaaggaattgctgaaccagttgatgaaggccctgca
tcccagaaaaggaaaaaggccaagcataaacacaagcataagaaaacaaaagtcaagaga
aaagaaccaatggtttcttcaaggatacaatcccatttgccagagaaggtgtcagtcagt
accaagaaggtgttcattgaggagatgattggcctggagcctgaagatgccttcaggata
gaccgccaacgtgacaaggacttgtggacatatgagtgcctctacaagggtcacattgct
ggctacaaaagacttgggcactcagtacttggagtacaggggaacctggatattttcaaa
cacgagaagaactcgagtaagaaagcggagccaatgaggtattgccataaaagaagcaga
gcactgctgaggaaggtgggagtcaaggtgaggcatgtggatggggaagctgctcaagtt
cagtacattcccctagtaggggtgacagacactgctgctgaccccttgtgggtgttagat
gaggccaccagacagtatgtccaaggtcggggcactgatgaaggtgccgcccaggaggag
atgcagtctgatgatgagattctccagcaggttgcaacatacaataaaaggctccgggat
gatacacaaaatgtaaaactctggctggagtttgtgaagttccaggacaaagtgttcagt
ggagttggagattcatggcaagggggtgggctttccaaggcagtgattgacaagaagctg
gcgatcctgagcagggcactgtcggataacccagggagtatagatctgaagctggcccag
ctggaggtgtgtaaggatgtgtgggatggggcacagcttgcccgggagtgggaccagctg
ctgtttgtccactccgccaacaccaagctgtggcacagctatctcatgtttcagcagtcc
agactcacctccttctctgtctccaagctcatcaagctgtaccacaagtgtttccgtgtg
ctcaccgctgttgtggaggggaacatgaagacagcaaggccagcagatgttccggactcc
aacctcatgggtgtgtttgtccagtattgtatgttcctgcaccaagtaggttacacagag
cgagctgtagcctcgtaccaggccctcattgagttcaacgtcttttgtccctcaagtctc
accgacacctcgactgcagacagagcaggagtgtttgagagtttctgggacagcagcgtt
cccaggtttggggagccaggggcggctggctgggcagcatggaggtgcagagacaagatg
tcagcagagacacctgttgtaacagcagatcctacagaagaagctgaggatgatgtcata
gccaaacagatacctcaatggcaaacatggttagaaatcgagacagtacgagaaaacgct
cattggctgccatggcgaccagatattttaaagaacgaaacagaggaagactgtgaggat
ttggagcgactggttctggtggacgacatcacaccagtactgttcaaagtttcagaacca
aatgctcagttccgtcttgtcatgtgtttgctagaccaactgggtgtggccacacgagat
gttctttctcagctgtgtctgcaagaacaagacgggatctcagtttcttccatccagctg
aacctccacaagatgtcccagttaccagggttaccagctgcaaggagtccagacctggat
ggagctgccaaccagagtgagacattacagagatttattcaccagatcctctcccaggca
gtgcatgtgttttcggggcagagtcagacagtcttcaccttgctgctcatccagaatgaa
tggaggaaacatggagttgattcacctagaaatttaccaagacacatatcaaaggagctc
agaaagtttgtgaaaaatctgcttaaggaaggtcataaccgtaataacctgactgtatgg
aatgcatacgcgtgtctggaacatgatcttgggaagagccaagaggctatgggtgttttg
gagaccgcactagctatgttcagtgggggcagcagtgaggacaagtctggcctgtgtctg
ctgtatcagacctactgccaacttctcctcaacatcacacagcccttccatgcagaccta
actcaaaagcagatggatgtgtctcaaaaacagaagacaaggctcttgttttgcctcatg
tctttagctgaaggcacaaagtttaaagttgagaaggaaccaatgatgaccacaagctct
atactgaggacacagcgtaaaataaaaactaaggtcactcaccttgccaggacaatctgt
gaagcaaagtcacctcaaggtgaaggtgacaccaaagtattccatcagcttctcagtgag
ctgaactgtctagctatgtttgacctgtgttcaattggtcttaaggctgccatgtcaaac
taccaagatgtcctgttgttgctggatggctgcaagtgttcagctcggtgccaagccctc
cttgcagtcagggagaatatcttcaggtcacagtggattcttctctgccatcaaatgtca
atcagtgcagtgcctctcagccagctgcgtgttgtcatagacagagccctggacgagttc
cccaacaactcgtcattcctgcagtgtctggtggacctcgagtccaggtcccacattgtc
gggcgcattcggcgctacatggacagagcattagtcaatccatcgtctcctttacctctc
atccatagtgtgctggtcgaagttggaagacttacctctcttcatgaggaatcacataca
gtctgtaacagtggtgtgatgcacagagtacgtggtttgttagagcgtggcactcggaac
tcagcctcacaacactgccccctggtttggaggctgtactgccatgtcgagagcaagtat
ggagacagagagcgagccagaggaatattataccaggccctgcagcaatgtccctgggtc
aaggtgctgtacaaggacggagtgtgtctatttgggcagagtcagctgcaagagatggtt
gacctcatgacagagaaagagctgcgtgttcagatccctttggaagaactagatttgtta
gctcagtctgatcctgttcctcaggtggaagagacgttgcttgatcacagtccacaagag
gaagaggatttgaagaaagtttaa
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