Haliotis asinina (tropical abalone): 137294121
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Entry
137294121 CDS
T10448
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi04140
Autophagy - animal
hasi04142
Lysosome biogenesis
hasi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
137294121
04140 Autophagy - animal
137294121
04148 Efferocytosis
137294121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hasi04131
]
137294121
Membrane trafficking [BR:
hasi04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
137294121
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
VPS18_solenoid_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
137294121
NCBI-ProteinID:
XP_067681182
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Position
8:55977203..56052530
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AA seq
883 aa
AA seq
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MHEAYEAAPILEKLPLQIESIACYDDILLVGTKQGHLLQYKIKRSTRVQEKKFEVTLERS
NKSFSKKPITQLAAVPEHYILISLSDNVISVHDLQSFGLVTCVSKTKGATLFATDVQKTP
SITGGEQTTLRIGVSSKRRVQLFYWKNRDFHELLADLSLYDVPRAMAWCKESLCVGFRRE
YYMISVKNGELTELFPVGSRQVEPIVTRLANDRLALGRDEMSILIDGEGKPARKEPVKWS
DIPIAIEHNPPYVLAILPKYVEVRTIEPNLNIQSIELSKPRLVCQGSNTVYVASSNFVWR
LAPTPISHQIKQLLQGKEFKLALHLADMQDEPDSEKEKRIRNINNLYAFDLFCQHKFEES
MKIFDSLGTDPSHVIGLYPNLLPQDFRNQLEYPDRLPDLEGGELEKGLLALIDYLTEKRN
QLLKDLNKDMATTAIVEGNVTIRSKKQLSQIIDTTLLKCYLQTNDALVAPLLRLKDNNCH
VEESERVLKKKEKFSELIILYEKKGLHQKALNLLMKQAARPDSPLKGHDRTVQYLQHLGA
DHLALIFEYSEWVLRKHPEDGLKIFTEDTPEIESLPRDEVLEFLERISKDLAIPYLEHII
SQCDDETPEFHNRLVHLYREKIQVLAEDYVESLPEAGDRPDKSKNEPAELEEYRVKLVVF
LQTSQHYVPEMLLARFPLDNFYEERAILLGRLGRHEQALGIYIHILKDPRLAEVYCRTHF
DKDKEGNKDVYVCLLKMFLQPPEPSTLGMAPGGHVSTPHKNIPAALKLLEDHAWKIETTK
ALELLPPETRVRDILTYLENVMEHRAAQRRSDQVLKSMLYNENLQVQEQRMYYQKVKVII
NDEKTCRVCRRRIGDSAFARYPNGLIVHYFCCKDPKTLPPDLK
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaagcgtacgaggcagctccaattctggagaaactccctctccaaatcgaatcc
atagcatgttatgatgatattttgctggttggaacaaaacaagggcacctgctgcagtac
aaaatcaaaagaagtacaagggtgcaagaaaagaaatttgaggtaaccttagagagatca
aacaaatctttctccaagaaaccaatcacacagcttgcagcggttcctgagcactacatt
ctgataagtctctctgataatgtcatcagcgtacatgacctgcagtcatttggcctcgtc
acgtgtgtcagtaagacgaagggggccacgctgtttgccacagatgtacagaaaactccc
tctatcactggtggggagcagacgacactcaggataggtgtgtcctccaagagaagggtg
cagttgttttattggaagaacagagacttccatgagttgttggctgacctgagtctgtac
gatgttccacgagcgatggcttggtgtaaggagtctctttgcgtaggattccgcagagag
tactacatgatcagtgttaaaaatggtgagcttacagaactcttccctgtagggagtcgc
caggtggagcccattgtcacaagactagccaatgaccgcctagcacttggtcgagatgaa
atgtccattttgatagatggggagggcaagcctgctcggaaggagccggtcaagtggtca
gacattcccatagcgatagaacataatcccccctatgtgctagccatcttacccaagtat
gtggaggtccgaactattgaacccaacttgaacatccagagtatagagctttccaaacct
agacttgtgtgtcaggggagcaacacagtgtatgtcgcttcatctaactttgtctggaga
ctggcaccgacacctatttctcaccagatcaaacagctgcttcagggaaaggagttcaaa
ctggctctgcatttagctgacatgcaagatgaacctgactctgagaaggagaagaggatc
aggaacatcaacaacttgtatgccttcgacttgttctgccaacacaagtttgaggaatcc
atgaagatatttgactcccttgggacagatccatctcacgtaatagggttgtaccccaac
ctgcttccccaggacttccgtaaccagctggaatatccagaccgactgccagacctggag
ggcggggagctggagaagggactgctagcactcatagactatctcactgagaagagaaac
cagttgctgaaggacctgaacaaggacatggcaacaacagccattgtggagggcaacgtg
accatccgctccaagaagcagctgagccagattatagacacaacgctcctgaaatgctac
ctccagacaaatgatgcccttgtggcaccgctgctgaggctgaaggacaacaactgccat
gttgaggagagtgagcgggtgctcaagaagaaggagaagttcagtgagctcatcattctg
tatgagaagaaaggtctccatcaaaaagccctgaacctgttgatgaagcaggcagctcgt
ccagactcacctctgaaaggtcacgaccggacagtgcagtaccttcagcatctgggtgct
gatcacctagctctgatatttgagtattcagaatgggtgctgaggaaacacccagaggat
gggctaaagatatttactgaagatacacctgagattgaaagtcttcccagagatgaggtg
ctggagtttctagagaggatatccaaagaccttgctattccatatcttgaacatataatt
tcacaatgtgatgatgagacaccagagtttcacaaccgccttgtacacctgtaccgagag
aagatccaggtgctagctgaggactatgttgagtctctgcctgaagcaggagatcgtcct
gacaaatcaaaaaatgaaccggcagagttggaggagtacagggtgaagctggtggtattc
ctccagacgtcccagcactacgtccctgagatgctgctggcaaggttcccactggataat
ttctatgaggagagagcgatcctactgggacggctcggaagacatgagcaggctcttggc
atctacatccacatcctcaaggatcctcgtctggctgaagtatattgtcggacacatttt
gataaagacaaggaaggaaacaaagacgtgtacgtgtgtctgctgaagatgttcctccag
cctccggaaccctccacactcggaatggcacctggcggtcatgtcagcacacctcacaag
aacatccccgccgccctcaaactgctggaggaccatgcatggaagattgagacgacaaaa
gctctagaattgttgcccccggagacccgagtccgtgacatcctcacctacctggagaat
gtgatggagcatcgagcagctcaacgccgctcggaccaggtgctgaagagtatgctgtac
aatgaaaaccttcaggtccaggaacagagaatgtactaccaaaaggtcaaggtcatcatc
aatgacgagaaaacatgtcgagtttgcaggcggaggatcggtgacagtgccttcgctcgc
tacccgaacggcctgattgtccactacttctgttgtaaagacccaaagacgttgccgcca
gatctcaagtga
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