Haliotis asinina (tropical abalone): 137295826
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Entry
137295826 CDS
T10448
Name
(RefSeq) leucine-rich repeat protein SHOC-2-like
KO
K19613
leucine-rich repeat protein SHOC2
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
137295826
SSDB
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GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
LRR_1
LRR_13
LRR_NLRC4
LRR_R13L1-DRL21
LRR_9
LRR_LRWD1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
137295826
NCBI-ProteinID:
XP_067683481
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Position
9:complement(22033337..22063114)
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AA seq
613 aa
AA seq
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MSRKTNKAQDNSVAAERLADYRGESVIPIMSTHGTGSDSPDLESHRQAQYSHDGCDDVVA
SMDNVSIREQFQAKEIPKEKKGSQGSIAVEPANPKKQVMVITGQNKAKPTVPARPSVKAD
LDIAKEFKKCKEEGAKRLDLSKSQISALPSSVKDLTQLVEVYLYGNRLTVLPPEIGNLTN
LQTLALSENSITSLPDSLEYLRDLRVLDLRHNKLQEIPKVVYKLHSVTTLFLRYNRIKHV
DEEISQLTKLTKFSLRENRIRDLPQGIGQLENLVTFDISHNHLEHLPEEICHCTNLNSLD
LQHNELLDIPERIGKLRLLTRLGLRYNRLTSIPRSLAHCVHMDEFNVEGNNISSLPEGLL
SSLTNLTSITLSRNAFQSYPSGGPSQFCSVYAINMEHNQINKIQFGIFSRATSLTKLNMK
DNQLTSLPLDLGTWTNMVELNLGTNQLSKIPDDIQNLQKLEVLILSNNCLRRLTSAIGSL
QKLRVLDLEENRLEQLPPEIGNLRDLQRLIVQSNQLTCLPRTIGFLKNLQYLGSGENNLT
SLPNEIGTLESLESLYINDNPELHSLPYDLAYCANLQIMSIENCPLSQIPAEIVARGPSL
VIQYLKLQGPYCP
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtctcggaaaaccaacaaggcccaagataactcagttgcagcagaacgactagctgac
tacagaggggagagtgttatccccatcatgtctactcacggtaccggctccgattcacca
gatttggaaagtcaccgccaagcacagtatagccatgatggctgtgatgatgttgtcgca
tcaatggacaatgtttccatcagggaacaatttcaagccaaagaaattcccaaggagaag
aagggtagccagggctccatagcagtggagccagcaaaccccaagaagcaggtgatggtg
ataactggacagaacaaggcaaagcctactgtcccagcacgaccgtcagtcaaggcagac
ctggatattgccaaagaattcaagaagtgcaaagaagagggagcgaagaggcttgatctg
agcaaatctcagatctctgcactccctagcagtgttaaagatttgacacagcttgttgag
gtgtatctctacggcaaccgtctgactgtgcttccgccagagataggaaatttaacaaac
ctccagacattggccttgagtgagaattccatcaccagtctgccggactcactggaatac
ctacgtgacctcagggtcctggatctcagacataataaactacaagagatacctaaagtg
gtgtacaagttgcactcggtgacaaccctgttccttcgatacaacagaatcaagcatgta
gatgaagagatcagccagctgactaaattaaccaagtttagtttaagggaaaacagaatt
cgagacttgcctcaagggattggtcagcttgagaacctggtgacctttgacatctcccac
aatcacctggagcacctacccgaggaaatttgtcactgtacaaatctgaactccctggat
ctgcagcacaatgagctgctggacatcccagagaggatcgggaagctgcgactcctcaca
cgactcgggttaaggtacaacaggttgacctctattccccggtccctggcccactgtgta
cacatggacgagttcaatgttgagggcaacaacatatcaagcttaccagaagggctgttg
tctagtctgacaaacctgacaagcatcacactgtccagaaatgcgttccagtcataccca
tctgggggaccatcacagttctgttcagtttatgcaatcaacatggagcacaaccagata
aacaagattcagttcggcatcttctcccgcgccacttcactgaccaagctgaacatgaaa
gacaatcaactcacatctctcccactagaccttggaacatggacgaacatggtcgagttg
aacttgggaaccaaccagctgtcaaagatccctgatgacatccaaaacctccagaaactt
gaggtcctcatcctcagcaacaactgtctgaggagattaacatcagccattggaagcctg
cagaagctacgagtgttggaccttgaggagaacagactggagcagctacctcctgaaatt
ggtaacctgcgtgatctccagcgactcatcgtgcagtctaatcagttgacatgtctgcca
cggactatcgggttcctgaagaacttgcagtatcttggttctggagaaaacaaccttaca
tccttaccaaatgagataggtacattagagagtttagaatccctgtacataaatgacaac
ccggagttgcacagtctgccgtatgacctggcatactgtgccaacttgcagatcatgagc
attgagaactgccccctcagtcagatcccagcggaaatagttgccagaggcccctctctt
gtaatacagtacctgaaacttcagggtccgtactgcccataa
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