Haliotis asinina (tropical abalone): 137296579
Help
Entry
137296579 CDS
T10448
Name
(RefSeq) regulator of nonsense transcripts 2-like isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03013
Nucleocytoplasmic transport
hasi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
137296579
03015 mRNA surveillance pathway
137296579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hasi03019
]
137296579
Messenger RNA biogenesis [BR:
hasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
137296579
mRNA cycle factors
P-body specific factors
137296579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Adeno_IVa2
Motif
Other DBs
NCBI-GeneID:
137296579
NCBI-ProteinID:
XP_067684483
LinkDB
All DBs
Position
9:17534601..17803728
Genome browser
AA seq
1403 aa
AA seq
DB search
MDANEGKQDEGLKSTKSNGVGKDCKREDVGTKAGRDSKDVGKDVSDRRRDDYPSKASSRD
GGKDRGRMGNGDRRKDPPHKSVRKGAGDGPGDYRDSRDRYDDYYDRRSSGQGRPPPDRGD
RRQDSRKGSNFVGKPDKLDKKSSTPNNGSKPKDVKTPAKIEQDRKAQKEKEEEEKKKKEE
EKRKNEEEKKRKEEEEKQLAEQRRVEEEERKLKEEEERKRLEEEREKQQLEDEKKMLQDY
IEETREKLTARVALREKNVAAAENRPDESFFGKLDSSLKKNTAFVKRLRNMTESQFEGLI
KDFGSLNLTKYIGEAASALAEVKLKMSDVQSAVQLCSLMHQRYAEFTPALLENFQKYLLN
KKDEKISNLSKYRVDLRFFAELISVGVFSLKEGLPVLANQLSILVNNDKDEHNNLSIISS
FCKHCGDDFVGILPRKIRLLSEKHHGAEIMKSKLLPPERQKACRNLLKDYSSSLMKHLIK
DHKELKGMERQNRRLLQTKGELSAERREGYENALTAYQKLHTSAAVLADLLDEDLPDLPE
EDLKQDETGGMFDFFSPMKGTECQYEGDCTLFEDEDTRTFYESLPDLRSFIPGILYKDSE
QSSSKDANKESDPVLEEVDLECLEVEDLEVELEEKLEEKLVMGDGNSSEDKDISIREEIA
EDLGEDRIFIPPEAEEDDGETGTLMKTQFEAYLQSLPNCVNRDLIDKAAIEFCMNFNTKS
NRRKLVRGLFTVHRTRYDLLPFYARLVAILNPCMPDVATDLVQYLKGDFKWHIKKKDQIN
IESKLKTVRFLGELVKFKMCPKVEVLHCLKMLMFDFSHHNIEMACALLESCGRFLYRSMD
SHHRTKAYLDVMMRKKAALHLDSRYTTMIENAYFYSNPPEFQQVTRIERPPMHEYIRKLL
YKDLSKITTEKVLRQMRKLDWDDAAIAFYTTKCLTAVWNIRYNSVHCAANLLAGLAPYHE
HVAIQVVDGVLEDIRLGMEVNHPKYNQRRVSCVKYLGELYNYRMVESAVIFKTLYSFITF
GISLDDNPTPLDPPEHLFRVRLVCTLLETCGQYFDKGSSKKKLDCFLVYFQRYYWFKMKN
QIWTVHRPFPQDVKNLVKDTLEMIRPKLKIYVSWEEAIKAAEDIENEYKTKIANLLPIIE
TGDESEVSEEEGLTPIQETDEEIEELSQSLSQSRLEDGTESSQDDQSGQSHSQTGSQTRD
GEDESEDSDRDEFLESAGEDETEDQITLVTGAPKRIVCQEDDDFMTAFDKMMSENIQARA
QESLKVPQLDIAMPVHLRSKTKKTVPGTGTGVTQPVPEVDTAINFVLMTRKGNKAQFTNL
NVPISAEFAAKFKEREQAEKMEKEKMKQVVLGIQQRQEEEDYQEMMASLNRPVPVNTNRE
RRIRYSHPKGAPDADLIFGSKKR
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaatgaaggcaaacaagatgaaggattaaaaagcaccaagagtaatggggtt
gggaaagattgtaagcgagaagatgtcggcaccaaggctggtcgtgacagtaaagatgta
gggaaggatgtgagtgacaggagacgagatgattatccatccaaggctagcagcagagat
ggaggaaaagatagagggaggatgggaaatggtgatcgaaggaaggatcctccccacaaa
tctgtgagaaagggtgcaggggatggacctggggactacagagatagtcgagacaggtat
gatgactactatgatcggagaagttcaggccaaggcagaccaccaccagaccggggtgac
cgaaggcaagattcaagaaaaggcagcaattttgtgggaaaaccagataaactagataaa
aaatcaagtacaccaaacaatggaagcaaaccaaaggacgtcaaaactccagccaagatt
gagcaggacagaaaggctcagaaagagaaagaagaagaagagaaaaagaaaaaggaagaa
gaaaagaggaagaatgaagaagaaaaaaagaggaaagaagaagaggaaaaacagctagct
gaacagaggagagtggaggaagaagagaggaagctcaaggaagaagaagagagaaagagg
cttgaagaggaaagagaaaaacagcagttggaggatgaaaagaaaatgttacaagactac
atagaagaaaccagagaaaagctgacagcaagagtagctctgagagagaagaatgttgct
gcagctgaaaatagacctgatgagtctttctttgggaaactcgattcaagcttgaaaaag
aatacagcatttgtgaaaagactcagaaacatgacagaatcacaattcgaaggtttaatt
aaggattttggaagtctaaacctgaccaagtacataggggaagctgcatcagccctggct
gaggtgaagctgaagatgtctgatgttcagtcggcagtgcagttatgcagcctgatgcat
cagagatatgctgagtttactcctgcactcctggaaaacttccagaagtatctactgaac
aagaaggatgagaagatttcaaatctaagcaagtatcgagtggatcttcgtttctttgcg
gaactgatatctgtgggcgtgttctcactgaaggaaggcctgccagtgttggccaatcag
ctgtcaatactggtaaacaacgacaaggatgagcacaacaacctctccatcatctccagc
ttctgcaaacactgtggggatgactttgttggtatcttgcccagaaagatcaggttgctt
tctgagaagcatcatggagcagagatcatgaaaagcaagttactgcctcctgaacgccag
aaagcctgcaggaacttattgaaagactactccagctccctgatgaaacacctcatcaaa
gaccacaaggagctgaagggcatggaaagacaaaaccgaagacttctacaaaccaaaggt
gaactgagcgctgagagacgtgaaggatatgaaaatgccttgacagcataccagaagctt
cacacaagtgcagcagttctagctgatctactagatgaggatttacctgaccttccagaa
gaagatctaaaacaagatgaaaccggaggaatgtttgattttttcagtcccatgaaagga
acagagtgtcagtatgagggagactgcactttgtttgaagatgaagatacaagaacattc
tatgaatctctcccagatctgaggtcattcattccagggattttgtacaaggacagtgag
cagtcttcaagtaaagatgcaaacaaggaatctgatccagtgctagaagaagttgacctg
gagtgccttgaggtggaggacctggaggtagagctggaagagaagctggaggagaaactg
gtgatgggtgatggtaacagcagtgaagacaaggacattagtatcagggaggaaatagca
gaggatttaggggaggacaggatcttcataccacctgaagctgaagaagatgatggtgaa
acgggaactttgatgaagacacagtttgaagcatacttgcagtctttacccaactgtgta
aacagagatctcattgacaaggcagccattgaattttgcatgaacttcaacaccaaatca
aaccggaggaagcttgttcgaggattgtttactgtgcatcggacaaggtatgacctgttg
cccttctatgcccggctggtagccattctgaacccctgtatgccggatgtagccaccgat
ctggtgcagtacctgaaaggagatttcaagtggcatattaaaaagaaagaccagatcaac
attgaatccaaactaaaaactgtcagattcttaggagaacttgtgaagttcaaaatgtgt
ccaaaagtagaggtcttgcattgcttgaagatgctgatgttcgatttctcccaccataac
attgagatggcctgtgctctcctggagtcttgtggcagattcctgtacaggtctatggac
tcacatcacaggacaaaagcatatttggatgtaatgatgaggaagaaggctgcccttcac
ctggacagccgctacacaacaatgatagagaacgcctacttctacagcaacccaccagag
tttcagcaggtgactcggatcgagagacctcccatgcatgagtacatacgcaagctcctc
tacaaagacctatctaaaattactactgagaaggtgctgagacagatgagaaaattggac
tgggacgatgcagctattgccttctacacgaccaagtgtttgactgcagtgtggaacata
cgctacaactctgtacactgtgcagcaaatctgctggctggacttgcaccttatcatgag
catgttgctatccaggttgtagatggtgtattggaggatatcagactaggaatggaggtg
aaccaccccaagtacaaccagaggcgtgttagttgcgtcaagtacctgggagagctgtac
aactaccgcatggttgagtctgctgttatcttcaagacactctactctttcatcacattt
ggcattagcttggatgataatcctactcccttggatcctcctgagcacttgttccgagtg
cgtcttgtgtgcactctcctggagacatgtggtcagtacttcgacaaaggatccagcaag
aagaaacttgactgctttctcgtatacttccagagatactactggttcaagatgaagaac
cagatctggacagtgcatcgtccattcccacaggatgtgaagaacttggtgaaggacact
ctggagatgatccgacccaagctgaagatttatgtcagttgggaggaagctatcaaagct
gcagaggacattgaaaatgaatataagacaaagattgctaacctgttgccaatcattgag
actggtgatgagagtgaggtatcggaggaggaaggactgactcctatacaagagactgat
gaagaaattgaagaacttagccagagcctgtctcagtcacgtctagaggatggcacagag
tccagtcaggatgatcagagtggtcaaagtcacagccagactggaagtcagacaagagat
ggtgaggatgagagtgaagacagtgatagagatgagttcctagagtctgctggagaggat
gagacagaggaccagataactttggtgacgggagctcctaaacgcattgtatgtcaagaa
gatgatgacttcatgactgcctttgacaaaatgatgtctgaaaatattcaggctcgtgcc
caggaatctctgaaggttccacagctggacattgctatgcctgttcacctgcgaagcaag
actaagaagactgttcctggcaccggcacaggtgttacacagcctgtccctgaagtggat
acagccattaactttgtgttgatgacaaggaaaggcaacaaagcgcagttcacaaacctg
aatgtaccaatatctgctgagtttgctgccaaattcaaggaaagagagcaggcagagaag
atggagaaggagaaaatgaagcaggttgtgttgggcatacagcagaggcaggaggaggag
gactatcaggaaatgatggcctccctcaacagaccagtgcctgtaaacacaaatcgtgag
cgtcgtattcgatattctcatccgaagggagcccctgatgcagatctcatctttggctct
aaaaaacgctga
DBGET
integrated database retrieval system
