KEGG   Haliotis asinina (tropical abalone): 137298475
Entry
137298475         CDS       T10448                                 
Name
(RefSeq) collagen alpha-1(II) chain-like
  KO
K19719  collagen type II alpha
Organism
hasi  Haliotis asinina (tropical abalone)
Pathway
hasi04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:hasi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    137298475
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:hasi00536]
    137298475
Glycosaminoglycan binding proteins [BR:hasi00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   137298475
SSDB
Motif
Pfam: Collagen COLFI VWC
Other DBs
NCBI-GeneID: 137298475
NCBI-ProteinID: XP_067686857
LinkDB
Position
10:complement(7438118..7460976)
AA seq 1438 aa
MRLQECVCVVVLLVVTVAAAPEKDRGCTYQGVQYENGAVWLPNKEDKCFECICDNGEAHC
SFLADCDGYASALTKEEKKMKVMAAVTGLPGEDGERGVQGPKGEQGEPGPDGTNGVPGPP
GSPGKSEMSADQAYRRYYAARFSNKAGGAAFGPQYLQAQVGPIGPRGLSGPPGPTGPQGA
RGIRGETGDSGPQGAPGSRGPPGPAGPRGPEGDSGRNGEAGAPGLPGARGGPGPSGMPGL
PGAKGHRGFPGFPGKRGEQGISGESGAVGAPGPSGAPGPVGPRGQSGERGPDGSTGPSGL
RGVDGLPGQPGAPGAMGASGPPGSPGMVGAKGEAGAKGPKGGVGPQGSRGENGMPGANGE
DGMNGPPGQPGSDGEKGTVGDPGPAGSPGFPGPRGPPGLLGSPGLPGLKGAAGAPGQAGY
KGEQGLKGSPGAPGDRGQPGAPGIQGRRGSRGGAGAAGPQGPNGERGLPGARGNPGSPGN
PGPKGEDGDAGLRGERGQTGSMGEAGRPGPPGPPGEAGAVGPPGPDGKSGSPGPIGPSGN
DGRPGEIGAPGPSGSPGQQGAQGPTGERGNPGKSGNPGQQGPRGPSGDNGPTGEMGPQGA
PGPEGEPGPRGAEGPPGGPGFQGAPGLPGPPGEAGTEGEPGTPGGPGQPGRTGNRGERGF
PGERGAMGPVGEPGPPGPVGPAGNDGERGIPGEIGVQGDVGPQGPMGMPGERGPAGEAGA
KGDDGEAGPPGPDGNTGRPGLAGPPGEPGPPGLAGPPAEKGQPGDPGYRGQSGPPGASGE
RGNAGPDGEPGYPGLPGPAGGAGMKGEAGLPGTKGEQGDAGAAGEPGSQGPAGVPGIQGR
KGPRGEQGVAGIPGEPGAPGAPGSQGLSGQQGLPGPAGPAGSPGIKGSRGSTGNMGQAGR
NGAPGQPGNPGLKGSRGEDGSPGSSGPPGPAGASGERGEPGMPGPPGETGPGGPQGPNGA
RGANGRRGSDGLPGKAGPPGPVGGPGINGPTGPSGAPGADGAPGLPGRQGEAGLVGDAGP
VGPVGLPGLQGPAGPSGAVGEAGSRGERGAIGPVGPRGPQGLRGSPGVQGEQGIDGEAGD
SGHTGDKGDPGYMGLPGLPGPEGPIGENGPPGHRGPAGERGNDGVRGQPGLPGEDGPDGP
RGAPGARGPSGEDGRRGAAGLPGNPGPPGPPGESVFGSALTGWATGSKGPGFMGDVPSAE
GEPEEARNAIKALKDVEEEIKKLRDPTGTKDAPGRTCHDLLKNNPDITNGWYFVDPNGGG
ISDAFEAECIFNGKRTETCLHPIQTGYERQHWFARKENPEAHVWFAETFDANGFFDYGMH
RSQVKYLHQMSSRARQDIAISCKNTVVIYDQAAGNHKKAVRLGSFDEEIMGPIAKKPYRF
RVKSDTCKEYNGQLGQTIIEVRGRGHRIERMPIIDVGLYDVGGEDQEFGIDIGPACFS
NT seq 4317 nt   +upstreamnt  +downstreamnt
atgcgccttcaggagtgtgtctgtgtagttgttctactggttgttacagtggcagccgcg
ccggagaaagatcgagggtgcacatatcaaggagttcagtatgagaacggagcagtttgg
ctaccaaataaagaggacaaatgttttgaatgtatttgcgacaacggcgaggcccattgt
tctttccttgctgactgtgacggttacgcctccgctctcaccaaagaagagaaaaagatg
aaggtcatggctgccgtcactggtctgcctggcgaggatggagaacggggcgtacaaggt
ccaaagggagagcaaggagagcctggtcctgatggaactaatggtgtccccggaccaccc
ggatccccagggaagagcgaaatgtcagctgaccaggcttaccgccgctactacgccgca
aggttctccaacaaggctggtggagccgccttcggacctcagtatcttcaagctcaagtt
ggccccattggaccacgtggattgtctggacctccaggacccaccggaccccaaggagcc
cgtggaatcaggggcgaaactggagacagtggaccacagggagcgcccggaagccgtgga
cctccaggcccagctggacctcgcggacctgagggcgacagtggacgtaatggtgaagca
ggagctccaggtctccccggcgctaggggaggccctggaccatctggtatgcctggactt
cctggtgccaagggacatagaggcttccctggcttccccggaaaacgtggagagcagggt
atttcaggagagagtggtgccgtcggtgccccaggtccatctggagctcctggcccagtt
ggtccccgtggtcagtctggcgagaggggtcctgatggttctactggaccttcaggtctt
cgtggtgttgatggtcttcctggacaacctggagcccctggtgcaatgggtgcatccggt
cctcctggatcaccaggaatggttggagctaagggagaagccggtgctaaggggcctaag
ggaggagttggacctcagggatcccgtggtgaaaatggcatgcctggagctaatggagag
gacggaatgaacgggccacctggtcagcctggaagtgatggcgagaagggtaccgttgga
gacccaggtccagccggttctccaggattccctggaccccgtggaccccccggacttttg
ggaagcccaggattgcctggtcttaagggagccgccggagcccctggacaagctggatac
aaaggagaacaaggtctgaaggggtctccaggagcacctggagacagaggacaaccagga
gccccaggaatccagggaagacgtggcagccgtggtggtgctggagccgccggacctcag
ggtcccaatggagagagaggcctccctggtgcgcgtggaaatcctggaagccccggaaac
cccggacctaagggagaagatggagacgccggactccgcggagagaggggacagacaggc
tcaatgggagaggctggtcgcccaggtccccccggaccacctggtgaggcgggtgcagtt
ggaccacctggacctgatggaaaatctggatcacctggacctatcggtccatctggtaac
gatggacgccccggcgagattggtgcccccggaccctctggctccccaggacagcagggt
gctcaaggcccaactggagagagaggaaaccctggcaagtctggaaaccccggacaacaa
ggtccacgtggaccctcaggcgacaacggaccaactggtgaaatgggaccccagggagca
cctggacccgagggagagcctggccccagaggcgctgagggaccccctggaggacctgga
ttccagggagctccaggtcttcccggccccccaggagaggctggaactgagggagagccc
ggcacacccggaggaccaggtcagccaggacgtactggaaacaggggagagcgtggtttc
cccggcgaacgcggagctatgggacctgttggtgagcctggaccacccgggccagttgga
cccgctggaaatgatggcgagagaggtattcccggagaaatcggtgtccagggcgacgtt
ggtccccagggacctatgggtatgccaggagagcgaggtccagctggagaggcaggagct
aagggagacgatggtgaggcaggtcccccaggccctgatggaaacactggccgacctggt
cttgctggtcccccaggagagcctggcccacctggtcttgccggtccccctgctgagaag
ggacaacctggtgaccctggctaccgtggacagtctggcccccctggtgcctctggagag
cgcggaaatgctggccctgacggagagcccggatacccaggccttcctggtcctgccgga
ggtgcaggtatgaagggagaggcaggactgcccggaactaagggagagcaaggagatgct
ggtgctgctggtgagccaggaagtcaaggaccagctggagttcctggtattcaaggtcgc
aagggtccaagaggagagcagggtgtggctggaatccccggtgagccaggtgcccccgga
gccccaggatcccagggtctctctggtcaacaaggtctcccaggccctgctggacccgcc
ggttctcccggtatcaagggatcacgtggctccactggcaacatgggacaggctggcaga
aatggtgctcccggacaacccggaaatccaggactgaagggtagccgtggagaagacggt
tcacctggatcatctggaccccctggtcctgcaggtgcatcaggagagcgcggtgaacca
ggtatgcctggaccacctggtgaaactggacccggaggaccccaaggacctaatggagct
cgtggagctaatggacgtcgtggaagcgatggacttccaggaaaggctggaccccctgga
cccgttggaggacccggcattaacggaccaacgggaccttctggagctcccggagctgac
ggcgcccctggtcttccaggacgtcaaggcgaggctggacttgttggagatgccgggcca
gttggacccgtaggtctaccaggacttcagggacctgctggacccagcggagcagtaggc
gaggcaggctcacgtggagaaaggggagcaattggacctgttggacccagaggaccccag
ggattgagaggctctcccggagttcaaggagagcaaggcattgatggcgaggctggagat
tctggtcacactggagacaagggtgacccaggctacatgggacttcctggtctacctgga
cccgagggtccaattggagagaatggtccaccaggacatcgtggaccagctggagagaga
ggtaacgacggtgtccgtggacaacccggtcttccaggagaagacggccccgacggcccc
cgtggtgccccaggcgcccgtggacccagtggagaagatggaaggaggggtgccgccggt
cttcccgggaatccaggaccccctggaccaccaggagaaagcgtgttcggcagtgctctc
accggctgggccactggatccaagggccctggcttcatgggtgatgtgccatctgcagag
ggtgaaccagaggaggcacgtaacgccatcaaggctcttaaggatgtagaggaggagatc
aagaaactgagggatcccactggaaccaaggacgcccccggacgtacctgccatgacctg
ctcaagaacaaccctgacatcactaacggttggtacttcgttgatcctaatggtggaggc
atcagtgatgcttttgaggccgaatgtatcttcaacggaaagaggaccgagacctgctta
catccaatccaaactgggtatgagagacagcactggttcgcaaggaaggaaaacccagag
gcacacgtatggttcgccgagaccttcgacgccaacggcttcttcgactatggaatgcac
aggtctcaagttaagtacctacaccaaatgagctcacgtgctcgccaggacatcgccatc
agctgcaagaacaccgtcgtcatctacgaccaagccgctggcaaccacaagaaggctgtg
aggcttggcagtttcgatgaggagatcatgggaccaattgccaagaaaccatacagattt
agagtaaagtccgatacttgcaaggaatacaatggacagttgggacaaacaataatagaa
gtacgcggccgcggacaccgcatagaaagaatgccaattattgatgtaggactatatgat
gttgggggagaagatcaagaatttggtattgacatagggcccgcgtgcttcagctga

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