Haliotis asinina (tropical abalone): 137299194
Help
Entry
137299194 CDS
T10448
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
137299194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hasi03021
]
137299194
03036 Chromosome and associated proteins [BR:
hasi03036
]
137299194
Transcription machinery [BR:
hasi03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
137299194
Chromosome and associated proteins [BR:
hasi03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
137299194
PBAF complex
137299194
GBAF(ncBAF) complex
137299194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM
SWIRM-assoc_3
Myb_DNA-binding
Myb_DNA-bind_6
BRCT_2
Motif
Other DBs
NCBI-GeneID:
137299194
NCBI-ProteinID:
XP_067687868
LinkDB
All DBs
Position
10:complement(10207800..10237961)
Genome browser
AA seq
1298 aa
AA seq
DB search
MAVLQRKKDGAPNAKFFEAVETIAQFDSARTWLHKNCKRYTQADPPTNKGLSSLVIQLLQ
FQEDAFGKSQTNPALTKLPMKCFLDFKAGGGLCQIFAAVFKFKSDQGWRRFDFQSPSRMD
RNVEMFMQIEKALVSSKCLPQPSIFIRPDVDKILIPKLKDIIKRHQGTMCDNADDATHIV
HTLPSHPPPNDEYFRPVLKRDRHCLVHWWYYPDSYDTWVTDTNIDYEPDSPYSHQGAFEV
SARWLLDLEEFNEWMNEEDYLVEDEFNADGSNKKYKKSNRLKLTIEDLNNPDPDRRDKKD
KKGKRKRSPSPVPEKKKRKSGRTPGLSSTKKRSARDEEEEDLTKDMEEPTPEPNIQEVAI
AKQASGSRSQKDSELQPIKGGTLMDIEEDQGDKVEPERAETGSTTDEGSKKDKEDQEDNL
TEQTHHIVIPSYSAWFDYNSIHAIERRALPEFFNGKNKSKTPEIYMAYRNFMIDTYRLNP
TEYVTSTACRRNLAGDVCAIMRVHAFLEQWGLVNYQVDADTRPTPMGPPPTSHFHILADT
PSGLQPINPPKTNQPPAAQQIMDFSEKSEDKEDDKRDMSKFGLRMDIYAKKALKDKSAAS
RMREWTDQETLLLLEALEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEEDYQQL
GPLTYQPIPFSQSGNPIMSTVAFLASIVDPRVASAAAKSALEEFSKMKDEVPPTLIDAQS
KMIEEATKEGKAVDASFCLEKSGIAGTAPEKEEGIKDPAETPNGEEAKPGETEETKKEIK
EEKKDESSEEAMETDSTDVVTKKEKEDKEETEEKKDKEEKEKEEDKEKVSEKESKDSEEK
SETAEKRDDEEKEKSKPEDESDKSEDKEATDKKEGEKEEEGKELEKVDKVKDGKDGNIAT
AAASALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREAL
EYQRQQLLQERQQFHMEQIRAAEYRARQIAMQQLASEQRQQQAQQQGGDAGAGSAGGANA
AVQNPTLAAAVGQGNYPMHGSPMPPQGPQVQQAHQVSSGSPAPPQSSSQPATPQQLTPTP
PQTQSPHPQGPQASAAPVHQPPSQPPGQSPYQQMTGPAQQQPYSTPSPAPQQFSTQSPGP
QGQPQQSYPQPGPQGPPPQPYQQPNPGQMAPYHQGQQQPPPQQQQQQPGSFQPHSQGQPS
YPPPHSQNQAPYPQQPQQSQQYPPHPQGPYPNFNQAGPYPPQAGQPYPPPQASQYPTPGH
GMPPQSTPLPASGRAMNQPGSAPESGSEQQPQVPPPSK
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctccaaagaaagaaagacggtgctcctaatgccaagttttttgaagccgta
gagactatcgcccaatttgatagtgcaagaacatggctgcacaagaactgcaaaaggtac
acacaagctgatcccccaaccaacaaaggcctgtcaagtctcgtcattcaactattgcag
tttcaagaagatgccttcggaaaatcccagacaaatccagcacttactaagttacctatg
aagtgtttcctcgacttcaaggcaggaggtggactttgtcagatatttgctgctgttttc
aaattcaaaagtgaccaaggatggagaagattcgacttccagtctccatcccgaatggac
aggaatgtggaaatgtttatgcagatcgagaaggctctcgtctccagcaagtgcttgcca
caaccctccatcttcatccgccctgacgttgacaagatcctcatccccaaactcaaggac
atcatcaagagacaccagggcacgatgtgtgacaatgctgacgacgccacacacattgta
cacacgttgccatcccatcctccacctaacgatgaatatttccgaccggtgctgaagagg
gatcgtcattgcttggtacattggtggtactacccagacagctatgatacctgggtgact
gataccaacattgactacgagcctgactccccatactctcaccagggtgccttcgaggtg
agtgcaagatggctgctggacttggaggaattcaacgaatggatgaatgaagaggactat
ctggttgaagatgaattcaatgctgatggcagtaataagaagtacaagaaatcaaacaga
ttgaagttgacaatcgaagatttgaacaatcctgaccctgaccgaagagataagaaagac
aaaaaagggaagaggaaacgatcaccatcaccagtgccggagaagaagaagaggaagagt
gggcggactccaggcctcagttcaactaagaagaggtcagctcgagatgaagaagaagaa
gatttgaccaaagacatggaggaacctacaccagaacccaacattcaggaggtcgccatt
gctaaacaagcatctggatcgaggagtcagaaggacagtgaactgcagcctatcaaggga
gggacacttatggacatagaagaggaccaaggggacaaggttgagccagagcgggcggag
actggatctacaacagacgaggggtccaagaaggacaaggaggaccaggaagataacctg
actgaacagactcaccacatagtcattcctagctactctgcctggttcgactacaacagc
atccacgccatcgagcgacgagcgctgccggaattcttcaatggaaagaacaaatcaaaa
actccagaaatttacatggcatatcgtaactttatgattgacacatatcgcctcaacccg
acggaatatgtgaccagcacagcctgtaggaggaatttggctggagatgtctgtgcaata
atgagagttcatgccttcctggaacagtggggtctagtcaactatcaggtggatgcggac
actcgccccacccccatgggacccccacccacgtcgcacttccacatcctagctgacacc
ccctctggtctgcagcccatcaacccacccaagaccaatcagccaccagcagcccagcag
atcatggacttcagcgagaagtctgaggacaaggaggacgacaagagagatatgagcaag
tttggtctccgaatggacatctatgccaagaaggctctgaaggataagagtgctgcatcg
cggatgcgtgagtggacggaccaggagactctgctgttgctggaagccctggagatgtac
aaggatgactggaacaaggtgtgtgagcatgttggcagccgtacccaggacgagtgcatc
ctccacttcctgcgtcttcccatcgaggacccctacttggaggaagattatcagcagcta
ggtccactgacgtaccagcccatccccttctcccagagtgggaatcccattatgtctacc
gtggctttcctggcttccatcgtagaccccagagtcgcaagtgcagcagccaagtctgcc
ttagaggagttctctaagatgaaggatgaagtcccgccaacactgatcgatgctcagtct
aagatgattgaggaggcaacaaaggaaggcaaggcagtagatgcctccttctgtctggag
aaaagtggaattgcaggaactgccccggagaaggaagaaggtatcaaggatcctgcagag
actccaaatggggaagaagccaaacctggtgaaacagaggagacaaagaaggaaatcaaa
gaagaaaagaaggatgagtctagtgaggaggccatggaaacagacagcactgatgttgtg
acgaagaaggagaaagaggataaagaagagacagaggaaaagaaggacaaggaggagaaa
gaaaaagaggaggacaaggagaaagtatcagagaaggaatctaaagattcagaagagaag
tctgaaactgctgagaagagagatgatgaagaaaaggaaaagtccaaaccagaagatgag
agtgataagtctgaagacaaggaagccacggataagaaggaaggagagaaggaggaagaa
gggaaggaattggagaaggttgataaagtgaaggatggcaaggacggcaacatcgccacc
gctgctgcctctgctcttgcagcagctgcagtcaaggcaaagcacctggctgctgtggag
gagaggaagatcaagagcctggtggcgctgctagtggagacacagatgaagaagctggag
atcaaactgagacacttcgaggaacttgagactatcatggacagggagagagaagcgcta
gagtatcagagacagcagctcctgcaggagaggcagcagttccacatggagcagatccgg
gcagcagagtacagggccaggcagattgccatgcagcagctagcatcagaacagaggcag
cagcaggctcaacagcagggaggggatgccggtgctggttccgccggtggagctaatgcc
gcagtgcagaaccccactctggcagctgctgtgggtcagggcaactaccccatgcatggg
tcacctatgcctccccagggtccacaggtacaacaggctcatcaggtgtcctcgggctcg
cctgctcctccccagtcctcctcccagcctgctacgcctcaacagttaaccccgacaccc
ccacagactcaatcaccccacccccagggacctcaagcttcagcagcgccagtgcatcaa
cccccgagtcagcccccaggacagtccccctaccagcagatgacagggccggctcagcag
caaccctattccaccccttctcccgctccacagcagttctccacccagtcaccaggaccc
cagggacagccccagcagagctacccccagcccggcccccagggcccgccacctcaaccc
taccagcagcccaaccccggtcagatggcaccttaccaccaaggacagcaacagcctccg
ccacaacaacagcaacaacaaccggggtctttccagccacattcgcaaggtcagccatca
tatccgcctcctcactcacaaaaccaagcaccttaccctcagcagccacagcagtcgcaa
cagtatccaccccacccccagggaccctacccgaacttcaaccaagctgggccttacccc
cctcaggccggccagccttaccctccacctcaagctagtcagtaccctaccccgggtcat
ggcatgccaccccagagcactccgcttcccgcttccggccgagctatgaatcagccaggt
agcgcacctgaaagcgggtcggaacaacaacctcaggtgccaccaccctccaaatga
DBGET
integrated database retrieval system
