Haliotis asinina (tropical abalone): 137299198
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Entry
137299198 CDS
T10448
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
hasi Haliotis asinina (tropical abalone)
Pathway
hasi04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hasi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
137299198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hasi04131
]
137299198
Membrane trafficking [BR:
hasi04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
137299198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
TPR_Vps41
Clathrin
Beta-prop_WDR36-Utp21_1st
WD40_CDC20-Fz
TPR_VPS8_2
Beta-prop_WDR5
zf_RING_Vps8_fungal
Beta-prop_THOC3
WD40_Prp19
WDR55
Beta-prop_WDR3_1st
zf-RING_Vps41
ANAPC4_WD40
Beta-prop_EML
zf-C3HC4
EIF3I
Beta-prop_WDR3_2nd
zf-RING_5
Beta-prop_EML_2
Beta-prop_DCAF4
WD40
Beta-prop_HPS5
zf-RING_UBOX
Beta-prop_WDR36-Utp21_2nd
Beta_prop_At2g24240
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
zf-rbx1
PHD_NSD
Beta-prop_SPT8
Beta-prop_NWD2_C
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
137299198
NCBI-ProteinID:
XP_067687874
LinkDB
All DBs
Position
10:13984853..14016889
Genome browser
AA seq
1398 aa
AA seq
DB search
MADDARSATDASSNLINFDIDELDDAELDLPAVESTPTLESILNEPDDSSSVLDEEEIPP
SAVQLFKADSGETSSISSQDSYLNDRPRQRRDRGKKTSKPIHGSVLKPSKLKNISAQILS
AADRVDAGMPTAITVSALIAIGTSHGLVLVFDPKQVLKWCLGSTAVGAQYGAVSSLSFNK
DCSRLLSGFAKGQITMWDLTTGKLLRTITDAHPQGTAVLHVEFTDSFVLAVCSDSGGSVF
ELEFKRLIGVRTCESQCLFSGSRGEVCVIEPLHMNLTIKDHPMQDVMVLAMASLSKVLLV
TLRPTLKVMFTHPLKGDPSTLPLLAWQFVIIQVSERDRVIDPVLVFARDQTIYFYQVICH
GPQDIRCSGLQKMEVSYQLLSVKWMNPRTIVTLDKSEKLHVIDVRSEEELEVIDISEVQL
VYGTSYFKSLATGGNVSQALAYAGEQACYQSITSHGGQLFLQGTRNVHVFTLRTWKERLE
VLVKQNKYQEALALALSFYEGKAKAVVGLTGSQKQRKELVAHLMLDLLFNYVDLSMTRLC
PEKGKIEELEEYYQEIVPVCVDYSLHLQRTDILFGRIYDRFGEDVIAQGTFLECLEPYIL
GDKLTSIPPSVMKDFVGHYETREMLDNVEACIVHLDITSLDIHQVVHLCWDHGLYDAIIY
VYNKGMYDYTTPLEELLLLLTSAVKTGKQLTDGQIKLGNKLLVYISCCLAGRAYPFGDIP
EEHVEEVKEKVFMTITGLHTSKPTEDEPAYPNLRSLLQFDTREFLNVLALAFEESEFNSE
KGIAKRQRVVDILLQIMVESVGFTPTQVGILFTFLARQMARHENTIIVNRVLFEQVLEFL
SNPEDESRHEERQQALMELIHAGGLQQFDEGRLLRLAENAKFYRVSEYLYEKRREYDKIL
GCYLRDPSRRYHSFSYIESIIQSDRYTAVEKGSVRTEALKNLQELVSIDCKQAAQTIITC
LADNLSDVVRKLQNKPTVLFEFLHGVISYRDSQSSAVHTDRQITIEPNIIELYINLMCEH
RPHDVCSFIKMNEGYRLEETLEICRKHKASEATAYLLEKAGDIQGAFGIVLENMQSKIKC
LMEVLESREKSQRDPVVLFQEVEAILLVIIQLCQRNSGKMDEAGREALWFPLLENIMSPQ
KRMKDTANKQIIEDFKQMTHHVLNSMMGYISPPAILKKIMQDPTYNTGKFGEVKELIIGM
LENYNYEQTLMKTCKNLLYHDLHVHLRSLTGAASRGFVPRGDSCHLCNRNFVNPSDTDPV
TVFRCGHSYHIACLRVLGSIHVIDGEETWVCYLCSNAKRTGRLHSSRFHRSLSNPSQAAL
HKQDKTKSKESALDPQHAQAFESVRRAMKTPSRLAILTELASGEPSGRRTGYNRTASSIF
QNETFKLKLAPPIAMELA
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatgctagatctgcgactgatgccagctcaaatcttatcaactttgacatt
gatgaactggacgatgctgaattggatcttccagctgtagaaagcacaccaacactggaa
agcattctcaatgagccagatgactcatcctccgtcttggatgaagaagagataccacct
agtgccgtccagctatttaaggctgattcaggggaaacctcctctatcagttcacaagat
agttacctcaatgaccgacctcgtcaacggcgagacagaggtaaaaagacttctaagcca
attcatggctctgtactcaagccaagcaagttgaagaacatatcagcacaaatcctgtct
gctgcagatcgtgttgatgcagggatgccaacagctataactgtctcagctctgattgct
attggcacttcccatggtcttgtccttgtgtttgatccgaagcaggtcctgaagtggtgc
ttaggtagcacagcggtaggggctcagtatggtgctgtgtcctccctcagtttcaacaag
gactgttcaagacttctgtctggcttcgcaaagggacagatcaccatgtgggacctgaca
actggcaaactactgcgaacgatcacggatgctcatccacaaggaacagctgtacttcat
gtagagttcacagacagctttgtattggcagtatgtagtgacagtggaggctctgtgttc
gagctggagtttaaacgcttgattggagtgagaacttgtgagtcccagtgcctgttttct
ggaagccgtggtgaagtgtgcgtgattgaacccctccacatgaacctaaccatcaaagac
cacccaatgcaggatgtcatggtgctggcaatggcatctctctcaaaggttttactggtg
acgttacggccaacacttaaagttatgtttactcatcctttaaagggcgacccaagtact
ctaccactgttggcgtggcagtttgtgatcatccaggtatcagagcgagaccgggtcatc
gacccagtgctagtgtttgctcgtgaccagacaatctacttctatcaggtaatctgtcac
ggaccacaagacattcgctgttcaggtctacaaaagatggaggtctcttaccagctgctc
agtgtcaaatggatgaacccacggactattgttacgctggacaagtctgagaagcttcat
gtcattgatgtgagatcagaggaggaactggaggtgattgacatctctgaggttcagcta
gtatatggcacaagttacttcaagtctttggccacaggagggaatgtcagccaggcccta
gcttatgcaggagagcaagcctgctatcagtcaatcaccagccatgggggacagctcttc
cttcagggaactcgcaatgtacatgtctttactctgaggacttggaaagagaggctggag
gttcttgtgaagcagaataaataccaggaggctctggcactggctctttctttctatgag
gggaaggcaaaggcagttgttggactgacgggatcacagaagcagaggaaggagttggta
gcccatctgatgctggacctgttgttcaactacgtggacctgtccatgacccgcctgtgc
cctgagaagggcaagattgaggagctggaggaatattaccaggaaatagttccagtatgt
gtggattactccctgcatctccagagaactgatattttatttggtcgtatttatgaccgt
ttcggtgaagatgtgatagcacaaggcacattcctagaatgtctggagccatatatactt
ggtgataagctcacatccattccaccatcagtcatgaaggattttgtcggccattatgaa
actcgggagatgttggataatgtggaggcctgcattgttcatttggacatcacaagtctc
gacattcatcaggtggttcacctatgctgggaccatggcctgtatgatgccatcatctat
gtgtacaacaagggcatgtatgactacacaacacccctggaggagttgttgctgttactc
acgtcagctgtgaaaactggcaaacagctcacagatggccagattaaattggggaataaa
ctgctggtctacatcagctgctgccttgctgggagagcctacccctttggagacattcca
gaagagcatgtggaagaggtcaaggaaaaggtgtttatgacaatcacaggtctacatacg
tcaaagcctacagaagatgagccggcctaccctaacctccgctcactgctgcagtttgac
accagagagttcctaaatgtcttagcactggcctttgaggaaagtgaattcaattctgag
aaagggattgccaagcgacagagggtcgtggacattctgctgcaaatcatggtggagagt
gtgggatttacaccaacacaagtcggaatcctcttcactttcctggctcggcagatggcc
agacatgaaaacaccatcattgtcaacagagtgctgttcgaacaggtgttggaatttctc
tccaaccctgaggatgaatctcgtcatgaggagagacaacaagcactcatggaactgatc
catgctggggggctgcagcagtttgatgaggggagactactccgtcttgcagaaaacgct
aagttttaccgtgtgagtgagtacctatatgagaaacggcgtgaatatgacaagatcctt
ggctgctatcttcgggatccttccagacggtaccattccttcagttacatcgagagcatc
attcagagtgaccgatacaccgctgtagaaaagggctcagttaggacagaagctctcaaa
aatctacaggaactggtgtctatagactgcaagcaggctgctcagactattattacatgc
ctggctgataacctcagcgatgtcgtcaggaaactgcagaataaacccaccgtcctgttc
gagtttctacatggagtcatatcctacagagattctcagagcagtgctgtccacacagat
cgccagatcaccattgagcccaatatcatcgagctgtatatcaaccttatgtgtgagcac
cggccccatgatgtgtgcagctttatcaagatgaatgaaggctatagacttgaagagaca
cttgagatttgcaggaagcacaaggcatctgaagccacggcatacctcctggagaaggcc
ggagacattcaaggagcatttggcattgtcttggagaacatgcagagcaagataaaatgt
cttatggaggtgcttgaatcaagggagaaatcgcagagagatccagttgttctgttccaa
gaagtggaagccattctgttggtcattattcagctctgtcagcggaactctggcaaaatg
gatgaagctggacgtgaggctctgtggttccccctgctagagaacatcatgtccccccag
aagaggatgaaagatacagcaaataaacagatcatagaagatttcaagcagatgacccac
catgtactgaacagcatgatgggatacatctccccaccagccatactgaagaaaatcatg
caggacccgacttacaatactggtaagtttggggaggtgaaggagctgatcatcgggatg
ctggagaattacaactatgaacagaccttgatgaaaacatgcaagaacctactatatcac
gatctacatgttcatctgcggagtctgacaggtgcagcaagtcgagggtttgttccacgt
ggcgacagctgccacctgtgtaaccgcaactttgtcaacccctcagacacagacccagtg
acagttttcaggtgtgggcacagttatcatatagcttgtttgagggtgctggggtcgatc
catgtaattgatggagaggagacctgggtgtgctatttgtgcagtaatgctaagaggaca
ggtcgactacacagctctcgcttccaccgatctctctccaacccaagtcaggctgctcta
cacaagcaggacaagaccaagtcaaaggagtcggcacttgatccacaacatgctcaagcc
tttgaaagtgttcggcgagcaatgaagactccatcaaggcttgcaatccttacagagctt
gcaagtggagaaccttcagggcgaaggacgggctacaacagaactgcctccagcatattc
cagaatgaaactttcaaactcaagctggctccacccatagctatggagctagcataa
DBGET
integrated database retrieval system
