Halopseudomonas sp. SMJS2: QAO71_01470
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Entry
QAO71_01470 CDS
T10383
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hasm Halopseudomonas sp. SMJS2
Pathway
hasm03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hasm00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QAO71_01470 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hasm03021
]
QAO71_01470 (rpoA)
03400 DNA repair and recombination proteins [BR:
hasm03400
]
QAO71_01470 (rpoA)
Enzymes [BR:
hasm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QAO71_01470 (rpoA)
Transcription machinery [BR:
hasm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QAO71_01470 (rpoA)
DNA repair and recombination proteins [BR:
hasm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QAO71_01470 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Motif
Other DBs
NCBI-ProteinID:
WGK61948
LinkDB
All DBs
Position
300238..301239
Genome browser
AA seq
333 aa
AA seq
DB search
MQNSVAEFLTPRHIDVQETSSTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGVAIKMHGRDHVTLTLSKKGPGAVTAGDIQLDHD
VEIINPDHHIATLSDNGVLNMKLTVARGRGYEPADARQSDEDESRSIGRLQLDATYTPVL
RVAYVVESARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQHQLAAFVDLKGDQEPV
VEQQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKVTA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaattcggttgccgagtttcttacaccacgtcatatcgacgttcaagaaacctcg
tccactcgcgccaagatcactcttgagccgctggaacgtggttttggtcataccctgggc
aatgcgctgcgtcgcatcctgctctcgtccatgcccggttgtgccgtggttgaggcggaa
atcgatggcgttttgcatgagtacagcgccatcgaaggcgtccaggaagatgtcatcgag
atcctgctcaacctgaaaggtgtagcgatcaagatgcatggtcgtgatcacgtcaccctg
accctctccaagaagggcccgggtgcggtcaccgctggcgacattcagctggaccacgat
gtggagatcatcaaccctgatcaccacatcgccacgctgtcggacaacggcgtcctgaac
atgaagttgactgttgcgcgcggtcgtggctatgagcctgccgatgcgcgtcagtcggac
gaagacgaaagccgttccatcggccgcctgcagctcgatgccacctacaccccggttctc
cgtgtggcgtacgtggtcgagagcgctcgggtcgagcagcgtaccaacctggacaaactg
gtcattgacctggaaaccaatggtacgctggatccggaagaagctattcgtcgcgccgcg
accattctgcagcatcagctggccgccttcgttgatctgaagggcgaccaggagcctgta
gtggaacagcaggaagatgagatcgacccgatcctgctgcgcccggttgacgacctggag
ctgactgttcgttcggccaactgtctgaaggctgaaaacatttactatattggcgatctg
atccagcgtaccgaagtggaactgctgaagactccgaacctgggcaagaaatccctgact
gaaatcaaggatgttctggcttcgcgtggtctgtcactgggtatgcgtctggacaactgg
ccgcctgcaagcttgaagaaggacgacaaggttacggcctga
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