Halopseudomonas sp. SMJS2: QAO71_02165
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Entry
QAO71_02165 CDS
T10383
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hasm Halopseudomonas sp. SMJS2
Brite
KEGG Orthology (KO) [BR:
hasm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hasm03016
]
QAO71_02165 (truB)
Enzymes [BR:
hasm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
QAO71_02165 (truB)
Transfer RNA biogenesis [BR:
hasm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
QAO71_02165 (truB)
Prokaryotic type
QAO71_02165 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
WGK62070
LinkDB
All DBs
Position
447317..448237
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AA seq
306 aa
AA seq
DB search
MSAPRSKRRDIDGVLIFDKPLGMTSNAALQKVRWLFNASKGGHTGSLDPLASGVLPLCLG
EATKFSQYLLDADKVYVTEARLGMTTTTGDAEGDVLEMKPCQVTLAEVESLLPRFTGEIE
QIPPMYSALKHEGQPLYKLARAGETVERKARSVTISRLELLGLEGDRLRLEVHCSKGTYI
RTLVEDLGAALGCGAHVSELRRIGAGPFDLSQAVTLETLEAMHAEGGAGALDQLLLPIDS
GLEDWPVVSLTEQTAFYLNHGQAVRVPGSPAFGMVRLRDHEGRFIGIGEMTDDARVAPKR
LMRFNG
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggcaccacgtagcaagcgccgtgatatcgacggcgtactgattttcgacaagccg
ctgggcatgacctccaacgccgcattgcagaaggtgcgttggctgttcaatgccagcaag
ggcggccataccggcagtctcgaccccctggccagcggcgtgttgcccctgtgcctgggt
gaggcgaccaagttctcccagtatctgctcgacgcggacaaggtgtacgtcaccgaagcg
cggctggggatgaccaccaccaccggcgatgccgagggtgatgtgctggagatgaagccc
tgtcaggttaccctggccgaggtagaatctctgctgccacgcttcaccggggagatcgag
cagatcccgcccatgtattcggcactcaagcatgaaggtcagccgctgtacaagctggcc
cgggccggggaaacggtggagcgcaaggcgcgatctgttaccataagccgacttgaattg
ctggggctggagggtgatcggctgcggctggaagtgcactgcagcaagggcacctatatt
cgcaccctggtcgaggatctgggcgccgcactgggttgcggcgcgcatgtgtctgaactg
cgccgcatcggtgctggcccgtttgacctgagtcaggcggtcacgctggagaccctcgag
gcgatgcatgccgagggcggtgccggagcgctggatcagttgttgctgccgatcgacagc
gggctggaggactggccggtggtgagtcttaccgagcagaccgccttctacctcaatcac
ggtcaggcggtgcgggttcccggcagtccggcgttcggtatggtccggctgcgcgaccac
gaaggccggttcatcggtatcggtgagatgactgatgatgcacgggtagcacccaagcgt
ctgatgcgtttcaatggttga
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