Halopseudomonas sp. SMJS2: QAO71_02175
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Entry
QAO71_02175 CDS
T10383
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
hasm Halopseudomonas sp. SMJS2
Pathway
hasm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hasm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QAO71_02175 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hasm03019
]
QAO71_02175 (pnp)
03016 Transfer RNA biogenesis [BR:
hasm03016
]
QAO71_02175 (pnp)
Enzymes [BR:
hasm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QAO71_02175 (pnp)
Messenger RNA biogenesis [BR:
hasm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QAO71_02175 (pnp)
Transfer RNA biogenesis [BR:
hasm03016
]
Prokaryotic type
tRNA degradation factors
QAO71_02175 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
S1_2
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
WGK62072
LinkDB
All DBs
Position
448742..450850
Genome browser
AA seq
702 aa
AA seq
DB search
MKPVIKQFKLGNNTVTLETGRIARQASGAVLVSIDDAVSVLVTVVGAKNADAGRDFFPLS
VHYIEKTYAAGRIPGGFFKREGRPTEKETLTSRLIDRPIRPLFAEGFMNEVQVVCTVVST
DKTTDPDVAAMIGTSAALAISGIPFDGPIAGARVGFDDVQGYVLNPTYEQLKTSRLDMVV
AGTEDAVLMVESEAQELTEDQMLGAVLFAHMEFQPAIEAIKELAAEAGKPAWDWQPAPEN
TVLLDAIKSQFGAGISEAYTITHKQSRYTRLGELRDAAIAALAGDEEGKPAAAEVKDAFG
EIEYRTVRESIVNGNPRIDGRDTKTVRPLNIEVGVLDRTHGSSLFTRGETQALVVTTLGT
ARDAQLLDTLEGEKKDPFMFHYNFPPYSVGECGRMGGTGRREIGHGRLARRGIQAVMPDM
DQFPYSIRVVSEITESNGSSSMASVCGASLALMDAGVPLKAPVAGIAMGLVKEGGKFAVL
TDILGDEDHLGDMDFKVAGTEKGVTALQMDIKIKGITEEIMELALHQAHDARLNILGQMN
QVLPASRKELSANAPTMISMKIDSDKIRDVIGKGGATIRGICEETGASIDITDDGTVKIF
AASKDAANAAKARVDGITAEAEIGKVYTGKVERIVDFGAFVSILPGKDGLVHISQIANQR
IEKVTDVLQEGQEVKVLVLDVDNRGRIKLSMKDVEAAENSGV
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaccggttatcaaacagttcaaattgggcaacaacaccgttaccctggaaaccggc
cgcatcgcgcgccaggcttccggtgcggttctggtcagcattgatgatgcagtcagcgtt
ctggtcaccgtggtgggcgcaaaaaacgccgacgccggccgcgacttcttccctctatct
gtgcactatatcgagaagacctatgctgcgggccgtattcccggtggcttcttcaagcgt
gaaggccgtcccaccgagaaggagaccctcacctcccgtctgatcgaccgcccgatccgc
ccgctgtttgccgaaggcttcatgaacgaagttcaggtcgtctgcaccgtggtgtccacc
gacaagaccaccgatccggatgttgcggcgatgatcggtacctccgcggcgctggccatt
tccggtattccgttcgacggcccgatcgccggtgcccgggttggtttcgatgacgtgcaa
ggctacgtgctgaacccgacctacgagcagctgaagacctcgcgcctggacatggtggtt
gccggtaccgaagacgccgtgctgatggttgagtccgaagcgcaggaactgactgaagac
cagatgctgggcgcggtcctgtttgcccacatggaattccagccggccatcgaggccatc
aaggaattggctgctgaggctggcaagccggcctgggactggcagcctgctccggaaaac
accgtgctgctggacgccatcaagtcccagttcggcgctggtatcagcgaagcctacacc
atcacccacaagcaatcgcgctacacccgcctgggcgagctgcgtgatgcggccatcgct
gccctggctggtgacgaagagggcaagcctgccgctgctgaagtgaaggacgctttcggt
gagatcgaataccgcaccgtgcgtgagagcatcgtcaacggcaatccgcgcatcgacggt
cgtgacaccaagaccgtgcgcccgctgaacatcgaagtcggcgtgctggatcgcacccac
ggctcctcgctgttcacccgtggcgaaacccaggcgctggtcgtgaccacgctgggtacc
gcccgtgacgcgcagctgctggataccctggaaggcgagaagaaagaccccttcatgttc
cactacaacttccctccctattcggtaggtgagtgtggtcgcatgggtggcaccggccgc
cgtgaaatcggccacggtcgtctggcccgccgtggtatccaggcggtcatgcccgatatg
gatcagttcccttacagcatccgtgtggtctcggaaatcactgaatccaacggttccagc
tccatggcttcggtctgtggtgcgtccctggcgctgatggatgccggtgtgccgctgaag
gcgccggttgccggtatcgccatgggtctggtcaaggaaggcggcaagtttgccgtcctg
accgacatcctgggtgacgaagatcacctgggcgacatggacttcaaggttgccggtacc
gagaagggtgttaccgcgctgcagatggacatcaagatcaagggcatcaccgaagagatc
atggaactggctctgcaccaggctcacgatgctcgtctgaatatcctcggtcagatgaac
caggtgctgccggcctcgcgcaaggaactgtccgccaacgcgccgaccatgatcagcatg
aagatcgattccgacaagatccgtgacgtgatcggcaagggtggcgcgaccatccgcggt
atctgcgaagaaaccggcgcctccatcgacatcaccgatgacggtaccgtgaagatcttc
gctgccagcaaagatgctgccaatgctgccaaggcacgggttgacggtattactgctgaa
gcggaaatcggcaaggtctacactggcaaggtcgagcgtatcgttgatttcggtgccttc
gtcagcatcctgcccggcaaggacggcctggtacacatctcgcagatcgccaatcagcgt
atcgagaaagttaccgacgtactgcaggaaggtcaggaagtgaaggtactggtactggac
gtggacaaccgcggccggatcaagctgtccatgaaggatgtcgaagcggctgaaaacagc
ggcgtctga
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