Halopseudomonas sp. SMJS2: QAO71_03710
Help
Entry
QAO71_03710 CDS
T10383
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
hasm Halopseudomonas sp. SMJS2
Pathway
hasm03410
Base excision repair
hasm03430
Mismatch repair
hasm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hasm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
QAO71_03710 (recJ)
03430 Mismatch repair
QAO71_03710 (recJ)
03440 Homologous recombination
QAO71_03710 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hasm03400
]
QAO71_03710 (recJ)
DNA repair and recombination proteins [BR:
hasm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
QAO71_03710 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
QAO71_03710 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
QAO71_03710 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
WGK62353
LinkDB
All DBs
Position
749479..751197
Genome browser
AA seq
572 aa
AA seq
DB search
MRIETRVAPAELPDLGELPPLLTRLYAARGVQSAAELDRSLKALLPWTLFKGMEQAVAVL
REALEQHQSILIVGDFDCDGATASSVAVLGLRALGAAQVDYLVPNRFEYGYGLTPEIVEV
ALTRQPDVLVTVDNGISSIDGVAAAKAAGLKVVVTDHHLPAEQLPAADAIVNPSQPGCDF
PSKAIAGVGVIFYVLMALRTALRDSGWFNAQRPEPNLAELLDLVALGTVADVVPLDANNR
ILVHQGLARIRAGRCRAGIRALLEVARRPAERLVSTDLGFIIGPRLNAAGRLDDMSLGIE
CLLTDDESLAREMASELDGFNRDRKSIEQDMQKQALAMLDATDLQEADLPFGLCLFDAEW
HQGVIGILASRLKDRYHRPVIAFADAGEGEIKGSARSVAGLHIRDALDAVAAANPGLISK
FGGHAMAAGLSLPATHFEDFRAAFDREVRRQLSAEDLTGRLLSDGELAVDEFNLQLAAHL
REAGPWGQHFPEPGFHGEFNLIQQRLVGERHLKMVLQPCGGTEVLDAIAFNIDSQVWPDP
NVRRVRLAYSLDINEYRGRQSLQLLVRHLQAC
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatcgagactcgcgttgctcccgccgaactgccggacctgggagaactgccaccg
ctgctgacccgcctgtacgccgcgcgcggcgtgcaatcggcggcggagttggaccgcagc
ctgaaagcgctgctgccctggacgctgttcaagggtatggagcaggcggtggcggtgctg
cgcgaggcgttggagcagcaccagtcgatattgatcgtcggcgatttcgattgcgatggc
gctaccgccagcagcgttgcggtactcgggctgcgggcgctgggcgcggcccaggtcgac
tatctggtgcccaaccggttcgagtatggctacggcctgactccggaaattgtcgaggtg
gcgctgaccaggcagcctgacgtgctggtgaccgtggataacggcatttccagcatcgat
ggcgtggcggccgccaaggcggctggtctcaaggtggtcgtcaccgatcatcacctgccc
gccgaacaactgcccgcggccgacgctatcgtcaaccccagccagcccggctgtgatttt
cccagcaaggcaattgccggcgtcggtgtgatcttctatgtactgatggctctgcgcacc
gcgctgcgcgacagtggctggttcaatgcgcagcgtcccgagccgaacctggccgagctg
ctggacctggttgccttgggcacggtggcggacgtggtgccgctggatgccaacaaccgc
atcctggtgcatcaagggctggcacgtattcgtgccgggcgttgccgggcgggcattcgc
gcgctgctggaggtggcgcggcgtcccgccgagcggctggtttcgaccgatctgggcttc
atcatcgggccacgcctgaatgcggcggggcggctggatgatatgagcctgggtatcgag
tgcctgctcaccgacgatgaatcactggcgcgcgagatggccagcgagctggacggtttc
aaccgtgatcgcaagagcatcgagcaagacatgcagaagcaggcactggccatgctggat
gccacggacctgcaggaagcggacctgccgttcggcctgtgcctgttcgatgccgaatgg
catcaaggcgtcatcggcattctcgcctcgcgactcaaggatcgctatcaccgcccggtc
attgcctttgccgatgcgggggagggtgagatcaagggctcggcgaggtcggtcgccggc
ctgcatatccgcgacgcgctggatgccgtcgccgcagccaatccgggattgatcagcaag
ttcggcgggcatgccatggcggcgggcttgtccctgccagccacccatttcgaggatttt
cgcgcggctttcgaccgcgaagtgcggcgccaactgagcgccgaggatctgactggccgc
ctgctgagcgatggtgagctggcggtcgatgagttcaatctgcaactcgcggcgcacctg
cgcgaggctgggccttggggtcagcattttccggagccgggcttccatggcgagttcaat
ctgatccagcagcggctggtcggcgagcggcacctgaagatggtgctgcagccctgtggc
ggtaccgaggtgctggacgccatcgctttcaatatcgattcccaggtatggcccgatccc
aacgtgcgccgggtgcggttggcctacagcctggatatcaacgagtaccgcggacgacag
agcctgcagttgctggtacggcacctgcaggcctgctga
DBGET
integrated database retrieval system
