Halopseudomonas sp. SMJS2: QAO71_05825
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Entry
QAO71_05825 CDS
T10383
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
hasm Halopseudomonas sp. SMJS2
Pathway
hasm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hasm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QAO71_05825 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hasm03019
]
QAO71_05825 (recQ)
03400 DNA repair and recombination proteins [BR:
hasm03400
]
QAO71_05825 (recQ)
Enzymes [BR:
hasm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QAO71_05825 (recQ)
Messenger RNA biogenesis [BR:
hasm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QAO71_05825 (recQ)
DNA repair and recombination proteins [BR:
hasm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QAO71_05825 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
HTH_40
HTH_7
Sigma70_r4_2
ResIII
HTH_23
Motif
Other DBs
NCBI-ProteinID:
WGK62752
LinkDB
All DBs
Position
1215448..1217577
Genome browser
AA seq
709 aa
AA seq
DB search
MREQALQRLRDIFGYGEFRGHQADIIDQVATGGDALVLMPTGGGKSLCYQIPGLLREGLT
VVVSPLIALMDDQVATLNELGLRAAALNSTLDEIERRDIAERLRRGEMDFLYLAPERLLK
PRTLQFLQSLDIALFAIDEAHCVSQWGHDFRPEYLQMGQLAELFPGVPRMALTATADERT
REEIAQRLRLEDAKRFVSGFDRPNIFYRIVPKDRPRQQLLGFLKDQRGNAGIVYCLSRKK
VEDTAQWLSDQGWPALPYHAGLPPELRAYHQKRFLNEEGLIMVATIAFGMGIDKSNVRFV
AHLDLPKSIEAYYQETGRAGRDGLPADAWMAYGLQDVLMLNQFMANSDGDERHKRIERHK
LDAMLALCEITTCRRQSLLGYFGDVLEEPCGNCDNCREPAATWDGSEAARMALSTVYRSG
QRYGVGHLVDILLGRDNEKIRTAGHQHLSTYGIGKQWSEQDWRSVFRQLIARGLAEIDLD
GFGSLRLSDTCRPLLRGEESLALRKDVSRTASVPSRSSDKPVIAEADKALWENLRALRKR
LAEAHGVPPYVVFADSTLVDMLRQRPTTLQDMALVSGIGAHKLERYGADFLQVLLEEGGA
ETAAPAHQAHEVQALAQAGMEAQQIARQTGLPIRQVYQKLAQAISIGQLDLHQAIDLPPG
QLERIQDLFLNEAEEDLPGVRAVAQELDEPVEEGVLHCIRAALVLEISG
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagcaagccttacagcggctgcgggatattttcggctacggagagtttcgcggg
catcaggcggacatcatcgatcaggtcgccaccggcggcgacgccctggtcctgatgccg
accggtggcggcaaatcactctgctatcagattcccggtctgctgcgtgagggcctcacc
gtggtggtgtcgccgttgatcgcgctgatggatgaccaggtcgccaccctcaatgagctg
gggctgcgtgcggcggcactgaactccacgctggatgagattgagcgccgggatatcgcc
gagcggctgcgccggggtgagatggattttctctatctggcgcccgagcgcctgctcaag
ccgcgcaccctgcagttcctgcaaagcctggatattgccctgttcgccatcgacgaagcc
cactgcgtatcgcaatggggtcacgacttccgccccgaatacctgcagatggggcagttg
gccgagctgttcccgggcgtgccgcgcatggcgctgaccgccaccgccgatgaacgcacc
cgcgaggagatcgcccagcgcctgcggctggaggatgccaagcgcttcgtgtccggcttc
gaccggccgaacatcttctaccgcatcgtgcccaaggatcggccccgtcagcagttgctg
ggctttctcaaggaccagcgcggcaatgccggtatcgtctattgcctgtcgcgcaagaag
gtcgaggacacggcgcagtggctcagcgaccagggttggccggcgctgccttatcacgcg
gggctgccaccggagttgcgcgcctatcaccagaagcgcttcctcaacgaggaaggcttg
atcatggtggcgaccattgccttcggcatgggcatcgacaagtccaacgtgcgcttcgtc
gcccacctggacctgcccaagagcatcgaagcctattatcaggaaaccggtcgcgccggt
cgtgatggattgcccgccgatgcctggatggcctacggcctgcaggatgtgctgatgctc
aaccagttcatggccaactccgacggtgatgagcggcacaagcgcatcgagcggcacaag
ctcgacgccatgttggcgctgtgcgaaatcaccacctgccgccgtcagtccctgcttggc
tattttggcgatgttctcgaggagccctgcggcaactgcgataattgccgggagccggct
gctacctgggacggcagcgaggcggcgcggatggcgctgtccaccgtctatcgcagcggc
cagcgttacggcgtcggccatctggtggatatcctgctgggccgggacaacgagaagatt
cgtaccgccgggcatcaacacctgtcgacctacggtatcggcaagcagtggagcgagcag
gactggcgctcggtgtttcgccaactgatcgcccgcgggctggcggaaatcgacctggat
gggttcggcagtctgcggctgtccgacacttgtcgcccgctgctgcgcggcgaggagtcc
ttggccctgcgcaaggatgtatcccgtacagccagcgtgcccagccgctccagcgacaag
ccagtgatcgccgaggccgacaaggcgttgtgggaaaacctgcgggcgctacgcaaacgc
ctggccgaggcccatggcgtgccgccctatgtagtattcgccgactcgaccctggtcgat
atgctgcgtcagcgcccgaccacattgcaggacatggcgctggtcagtggtattggcgcg
cacaagctggagcgttacggtgcggacttcctgcaggtgctgctggaagagggtggcgcg
gagaccgctgcgcccgcacatcaggcccatgaggtgcaggcactggcccaggccggcatg
gaagcgcagcagattgcccggcagaccgggttgccgatccggcaggtctaccaaaagctg
gcccaggccatcagcatcggtcaactggacctgcaccaggccatcgacctgccaccgggt
cagctggagcgaatccaggatctgtttctcaatgaagcggaagaagacctgcccggcgta
cgcgccgttgcgcaggaactggacgagccggtggaggagggcgtgctgcactgtatccgc
gccgcgctggtactggaaatcagcggctga
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