KEGG   Halopseudomonas sp. SMJS2: QAO71_06090
Entry
QAO71_06090       CDS       T10383                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
hasm  Halopseudomonas sp. SMJS2
Pathway
hasm03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hasm00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    QAO71_06090 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hasm02044]
    QAO71_06090 (tssM)
Secretion system [BR:hasm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   QAO71_06090 (tssM)
SSDB
Motif
Pfam: IcmF-related IcmF-related_N IcmF_C IcmF_helical AAA_29 DUF6020 FmiP_Thoc5
Other DBs
NCBI-ProteinID: WGK62802
LinkDB
Position
complement(1276281..1279754)
AA seq 1157 aa
MNIRSVLYRALALFRQGWALSLCVVLALAVLVWFSGPLLAINDRKILAPVANRLLLISLI
VLIWGLCMAFVHWRNGKQKKAEEDDEQAQERLRREGIIVEEQYELHNRYRNAVRTLRRSS
FYRGRSERWRSELPWYLLIGPQGSGKTSLLDFSGIEFPLNKSEKGRMTRDISPTRHADWY
FAEHAVLIDTAGRYLTQPDNQIDGLAWQTLLTLLRRRRPRPLNGVLVNVPMDQLLGQNEL
GLETLARQTRQRLLEINQKLGMDVPVYLVLSKADELLGFDEYFDQLARDEADQVLGATFG
EGQDSTSIQVVREEFEELLRRLNSQVISRLHQERDTQRRGRILDFPHQLGQIGERLGLFI
ELAFSGNRYQQATQLRGFYLTSAPHLQSQVDPLTASIGQNLSPLASELPSLRSGQARFIQ
HLLSRVVFPESELAGLDQREVKRINWRQRSMYACAVVCLMALGITWTSGFSNNHDRLERL
REMGRELGQERHGIESRDDARDILGVLDASYAASQLFPPADQVAWRHRGGLYQGEKVEST
LYQAYRRDLETLLLPRVGQQLERQIRYSMNNRERLLDNLRAYLMLNLERRRDATWLQNWM
AADWSRLYPGNNRVQEGLNNHFRRLLDESFSPYRLNGRLVAEARLQLRSESLASILYRSL
GEQAESLPEYRLAHHLGPNATLVTGSNYGIPGFYTRKGYQKMFADRGAGLVGNILKDNWV
LGENDKLSSKDMERLQAEMEQLYFQDYANYWSEALSLLKSEPLINANQAAQQLAGLTTSS
SPLLRLLTEVRDNTRFTMVEPPVDGLPDTDSLSVVGPATNNARQLLERRFEPLHRLLNEQ
GAASPELATAMQALNGLQQQLSGLAHASSPQQAAFEMAKVRMTGRQDAINQVRANADLLP
QPIGNWFSSMAAESWMLVLDDAYRYIAERYRSEFYAPYRASLHQRYPFLANTESEVALTD
FREFFKVHGVADNFFDNYLRPFVSGSANRYHLRRVDGRGLPLSSQFLAQMSRIQTIRKSF
FSESPDEPQILFKLEPYSLDSSLGRASFRFGDQNMEYRHGPIVQTPFRWPATAEDGRITL
TVEDLGGKRTSIEQNSGAWSLFRLLDQMEVAHHNDRDVLLVKASLGGMRANYLLHSQRSP
NPFDISLMRGFSLPAKL
NT seq 3474 nt   +upstreamnt  +downstreamnt
atgaatatcagatctgttttgtatcgcgctctcgcattgtttcgccagggctgggccttg
agcctgtgcgtcgtgctggcattggctgtgctggtctggttcagcggcccgttgctggcc
atcaatgaccgcaagatcctcgccccggtcgccaaccgcctgctgcttatcagcctcatc
gtcctcatctggggcttgtgcatggctttcgtccattggcgcaacggcaagcagaagaag
gccgaggaggacgacgaacaggcgcaggaacgtctgcgccgcgaaggcatcatcgtcgaa
gagcagtacgagctgcacaaccgctatcgcaacgccgtccgcaccctgcgccgctccagt
ttctaccgcggacgcagcgagcgctggcgcagtgagctgccctggtacctgttgatcggc
ccccagggcagcggcaagaccagcctgctggatttttccggcatcgagttcccgctgaac
aagagcgaaaagggacgcatgacccgggatatttccccgactcgccatgccgactggtat
ttcgccgagcatgcggtgctgatcgataccgctggccgttatctcacccagccggacaac
cagatcgacggcctggcctggcagaccctgttgaccctgctgcgtcgccgccggccgcgc
ccgctcaatggcgtgctggtgaacgtgcccatggatcagctacttggccagaacgagctg
ggtctggaaaccctggcccggcagacccgccaacggctgctggagatcaaccagaagctg
ggcatggacgtgcctgtttatctggtgctgagcaaggccgatgaactgctcggcttcgat
gagtacttcgatcagctggcgcgcgatgaagccgatcaggtactgggcgcgaccttcggg
gagggccaggacagcaccagtattcaggttgttcgcgaggagttcgaggaactgttgcgc
cgactcaacagccaggtcatctcccgcctgcatcaagagcgcgacacccagcgccgcggc
cgcatcctggactttccccatcagttgggccagatcggcgagcgtctcggtctgttcatc
gaactggccttctccggcaatcgctaccagcaggcaacgcagctgcgcgggttctatctg
accagcgcaccgcacctgcagagccaggtcgacccgctgactgccagcatcggtcagaac
ctgtcgccattggccagcgagttgccgtcgttgcgcagcggccaggcgcgcttcattcag
catctgctcagtcgggtggtgtttcctgaatccgagctggccgggctggatcagcgcgag
gtgaaacgcatcaactggcgtcagcgtagcatgtatgcctgcgccgtcgtctgtctgatg
gcgctgggcattacctggaccagcggcttctccaacaaccatgaccgcctcgaacggctg
cgggaaatgggccgcgaactcggccaggaacgccacggtatcgagtcacgggatgacgcg
cgggatattctcggcgtgctcgatgccagctatgcggccagtcagttgttcccaccggcg
gaccaggttgcctggcgccatcgcggcgggctgtatcagggtgagaaggtagaatcgacg
ctgtaccaggcctaccgccgggatctggaaaccttactgctgccgcgggtcggccagcag
ctggaacggcagattcgctacagcatgaacaaccgcgaacgcctgctggataacctgcgt
gcctatctgatgctcaacctggaaaggcgccgggatgccacttggttgcagaactggatg
gccgccgactggtcacgtttgtaccccggcaacaatcgcgtccaggaagggctgaataac
cacttccgccgcctgctggacgagtcgttctcgccctaccggctcaatggccgtctggtt
gccgaagcgcgactgcaactgcgtagcgaatccctggccagcattctgtaccgcagcctg
ggcgaacaggccgagagtctgccggagtaccgtctggcccaccatctgggtcccaacgcc
acactggtcaccggcagcaactacggcattcccggtttctacacccgcaagggctaccag
aagatgttcgccgaccgtggcgcaggattggtgggcaatattctcaaggacaactgggta
ctcggcgagaatgacaaactcagcagcaaggacatggagcggctgcaggcggaaatggaa
cagctgtattttcaggattatgccaactactggtccgaggcgttgtcactgctgaaatcc
gaaccgctgatcaatgccaatcaagcagcgcagcaactggccggccttaccacctccagc
tctccgttgctgcgcttgcttaccgaggtgcgtgataacacccggttcacaatggtcgag
ccacccgtcgatggcctgccggatacggatagtctgtcggtagtcggccccgcgaccaac
aatgctcggcaactattggagcgccgctttgagccgctgcatcgcctgctcaacgagcag
ggtgccgccagccccgaactggccaccgccatgcaggccctcaacggtctgcagcagcaa
ttgtccggattggcccatgccagctcaccgcagcaggccgccttcgagatggccaaggta
cgcatgaccggtcgccaggatgcaatcaaccaggtacgcgccaatgccgatctgttgccc
cagccgatcggcaactggttcagcagcatggcggcagaaagctggatgctggtgctggat
gatgcttaccggtacatcgccgagcgctatcgcagcgagttctatgcgccctaccgggcc
tccctgcaccagcgctaccccttcctcgccaacactgaaagcgaagtggctctgaccgat
ttccgtgaatttttcaaggtccatggcgtggcggacaacttcttcgataactacttgcgt
cccttcgtcagtggcagcgccaaccgctaccacctgcgccgggtcgatgggcgcggcctg
ccgttgtccagtcagttcctggcgcagatgagccgtattcaaaccattcgcaaaagcttc
ttcagtgaaagccccgacgagccgcagatcctgttcaaactggaaccttactcgctggat
tccagcctcggtcgcgcgagtttccgcttcggcgaccagaatatggagtatcgccatggc
cccatcgtgcagaccccgttccgttggccggcaacggcggaagatggtcgcatcacgctg
accgtggaggatctgggtggcaagcgcaccagtatcgaacagaactccggcgcctggtcg
ctgttccgcctgctggatcagatggaagtcgcccatcacaatgaccgcgatgtattgctg
gtcaaggccagtctgggcggcatgcgagcgaactacctgctgcacagccagcgctcaccc
aacccattcgatatcagtctgatgcgcggcttcagtctgccggcgaaactgtaa

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