KEGG   Halopseudomonas sp. SMJS2: QAO71_06145
Entry
QAO71_06145       CDS       T10383                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
hasm  Halopseudomonas sp. SMJS2
Brite
KEGG Orthology (KO) [BR:hasm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hasm02044]
    QAO71_06145 (tssC)
Secretion system [BR:hasm02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   QAO71_06145 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: WGK62811
LinkDB
Position
complement(1291273..1292751)
AA seq 492 aa
MSTQTTAISTPSASDDASILDRIIAETRLTPDDEAYGIARRGVSAFIEELLKPHNDKEPV
KKAMVDRMIAEIDAKLSQQMDEILHHERFQALESSWRGLKLLVDRTDFRENIKFEMINAS
KQDLLEDFEDSPEIVQSGLYKHVYTAEYGQFGGQPVGALIANYYFDPSSQDIKTLQHVAS
VASMSHAPFIASAGPRFFGLESFTGLPDIKDLKDHFEGPQFAKWQGFREREDARYVGLTL
PRFLLRNPYDPEDNPVKSFVYKENVANSHEHYLWGNTAFTFATRLTESFAKFRWCPNIIG
PQSGGAVDDLPLHHFESMGEIETKIPTEVLVSDRREYELADEGFIALTMRKGSDNAAFFS
ANSTQKAKFFGNSEEGKAAELNYRLGTQLPYLFVVNRLAHYLKVLQREQIGSWKERTDLE
LELNRWIRQYVADQDNPNPEVRGRRPLRAAQISVADVEGEPGWYRVTLSVRPHFKYMGAD
FTLSLVGKLDKE
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgagcactcagacaaccgccatcagcacacccagcgccagcgacgatgccagcattctc
gaccgtatcatcgccgaaacccgcctgaccccggacgatgaagcctacggcatcgcccgc
cgcggcgtctccgctttcatcgaagagctgctgaaaccccataacgacaaggagccggtc
aagaaggccatggtcgatcgcatgatcgctgagatcgacgccaagctcagccagcagatg
gacgagattctgcaccatgagcgcttccaggcactggaatcctcctggcgcggcctgaaa
ctgctggtcgaccgcaccgacttccgcgagaacatcaagttcgagatgatcaatgcctcc
aagcaggatctgctcgaggacttcgaggatagcccggagattgtccagtccggcctgtac
aaacatgtctataccgctgaatacggccagttcggcggccagccggtcggcgccctgatc
gccaactactatttcgatcccagctcccaggacatcaagaccctgcagcacgtcgccagc
gtcgccagtatgtcccacgcgccattcatcgcttccgctggtccgcgtttcttcggtctg
gaaagcttcaccggcctgccggacatcaaggatctcaaggatcatttcgaaggtccgcag
tttgccaagtggcagggcttccgcgagcgcgaggatgcacgctacgtcggcctgacactg
ccacgctttctgctgcgcaatccctacgacccggaagacaatccggtgaagagcttcgtc
tacaaggagaacgtcgccaacagccacgagcattacctgtggggcaacaccgcgttcacc
ttcgctacccgcctgaccgagagcttcgccaagttccgctggtgcccgaacatcatcggc
ccgcagagcggcggggcggtcgatgacctgccgctgcatcatttcgagagcatgggcgag
atcgaaaccaagatccccaccgaggtgttggtgtccgatcgccgcgaatacgaactggcc
gatgaaggtttcattgccctgaccatgcgcaagggcagcgacaacgccgccttcttctcc
gccaactcgacgcagaaagccaagttcttcggcaactccgaagaaggcaaggcggcggaa
ctcaactaccggctcggtacccagttgccctacctgttcgtcgtcaaccgcctggcccat
tacctcaaggtgctgcagcgcgagcagatcggctcctggaaggaacgcaccgacctggag
ctggagctgaaccgttggattcgccagtacgtggctgatcaggacaatcccaacccggaa
gtccgtggccgacgcccgttgcgcgcggcgcagatcagcgtggccgatgtggaaggcgag
ccgggttggtaccgggtcaccctcagcgtgcgtccgcacttcaagtacatgggggcggat
ttcaccctgtcgctggtgggcaagctggacaaggagtaa

DBGET integrated database retrieval system