Halopseudomonas sp. SMJS2: QAO71_06315
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Entry
QAO71_06315 CDS
T10383
Name
(GenBank) LysR substrate-binding domain-containing protein
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
hasm Halopseudomonas sp. SMJS2
Brite
KEGG Orthology (KO) [BR:
hasm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hasm03000
]
QAO71_06315
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
hasm01504
]
QAO71_06315
Transcription factors [BR:
hasm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
QAO71_06315
Antimicrobial resistance genes [BR:
hasm01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
QAO71_06315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
TXNDC16_3rd
HTH_IclR
MarR_2
ExbD
HTH_30
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
WGK62838
LinkDB
All DBs
Position
complement(1325567..1326511)
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AA seq
314 aa
AA seq
DB search
MDRFDAMQAFVRVVETSSFTKAAETLHLSKTTVTQLVQQLEARLSVRLLNRTTRKVNVTP
DGAAYYERVLRLLADMDDAETSLSGALASPRGRLRVDVPSPFASMILVPALPAFHARYPD
IQLHLGVSDRVVDLIDENVDCVVRGGAITNQSLVARHAADLPLAVYAAPSYLARAGRPGH
PSELELPHHRIVGLSWSGTRRVFPSTVRRDGESIDVQGRSTLVVDDGNAYLAAGLAGIGA
LWLPSYMAQAHVARGELIPLFTDWQLDPMPMYVAFPQNRHVSAKLRVFIDWVVELMAEHA
PVVSRPPLRGGAGS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaccgtttcgatgccatgcaggcctttgtccgcgtcgtggaaaccagcagcttcacc
aaggcggcggaaaccctgcacctgagcaagacgaccgtgacgcaactggtgcaacaactg
gaggcgcgcctgagcgtcaggttgctgaatcgcacgacacgcaaggtcaacgtaacccct
gacggcgcggcttattacgaacgtgtgttgcgcttgttggccgatatggacgatgccgaa
accagcttgtccggcgccttggcgtcgccccggggcaggctgcgagtggatgtgcccagt
ccgtttgccagcatgattctggtgccggcgttgccggcctttcacgccaggtatcctgac
attcagctgcatcttggcgtgagcgatcgtgtcgtggacttgattgatgagaacgtggat
tgcgtcgtacgcgggggagcgattaccaaccagtcgctggtggcgcggcatgcggcggat
ttgccgctggcggtgtatgcagcgccgagctacctcgcgcgggcgggtcgtcccggccac
cccagcgagttggaattgccgcatcaccgtatcgtgggcttgtcatggtcgggcactcgg
cgtgtgttcccgtccaccgtacgtcgtgacggcgaaagcattgacgtgcaaggtcggtcc
actctggtggttgacgatggcaatgcctatctggcggcaggcctggcgggaatcggcgcc
ctctggctgccgtcctatatggcccaagcgcacgtggcgcgaggtgagttgatccctttg
tttacggattggcagcttgatccgatgccaatgtacgtcgcatttccccagaaccggcac
gtcagtgcgaaactgcgcgtgttcatcgactgggtcgttgagttgatggcggagcacgcg
ccggttgtatcccgacctcccttacgcggcggtgcgggctcctag
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