Halopseudomonas sp. SMJS2: QAO71_07285
Help
Entry
QAO71_07285 CDS
T10383
Symbol
hupB
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
hasm Halopseudomonas sp. SMJS2
Brite
KEGG Orthology (KO) [BR:
hasm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hasm03032
]
QAO71_07285 (hupB)
03036 Chromosome and associated proteins [BR:
hasm03036
]
QAO71_07285 (hupB)
03400 DNA repair and recombination proteins [BR:
hasm03400
]
QAO71_07285 (hupB)
DNA replication proteins [BR:
hasm03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QAO71_07285 (hupB)
Chromosome and associated proteins [BR:
hasm03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
QAO71_07285 (hupB)
DNA repair and recombination proteins [BR:
hasm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
QAO71_07285 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Barstar
ACP_syn_III_C
UFL1_C
Motif
Other DBs
NCBI-ProteinID:
WGK63017
LinkDB
All DBs
Position
1550092..1550364
Genome browser
AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADIPKAAAGRALDAVIESVTGALKEGDSVVLVGFGTFAVKERAARTG
RNPQTGEPIEISAAKIPGFKAGKALKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtctgaattgatcgatgccattgctgcatctgccgatattccgaaagctgcc
gccggtcgtgctctggacgccgtcatcgagtccgttactggtgctctgaaggaaggtgat
tcggttgttctggtaggctttggtacctttgccgtcaaagagcgcgctgcccgtactggt
cgcaacccgcaaactggcgagccgattgaaatcagcgctgccaagattcccggcttcaag
gctggtaaagcactcaaggacgccgtcaactga
DBGET
integrated database retrieval system
