Halopseudomonas sp. SMJS2: QAO71_08620
Help
Entry
QAO71_08620 CDS
T10383
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hasm Halopseudomonas sp. SMJS2
Brite
KEGG Orthology (KO) [BR:
hasm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hasm03009
]
QAO71_08620 (rimO)
Enzymes [BR:
hasm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QAO71_08620 (rimO)
Ribosome biogenesis [BR:
hasm03009
]
Prokaryotic type
ribosomal protein modification factors
QAO71_08620 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
DUF5005
RNase_II_C_S1
CLP1_P
YajR_YAM
Motif
Other DBs
NCBI-ProteinID:
WGK60176
LinkDB
All DBs
Position
1853745..1855091
Genome browser
AA seq
448 aa
AA seq
DB search
MTDTATPTKNSAPSVGFISLGCPKALVDSERILTQLRTEGYQVVPTYEGADVVVVNTCGF
IDSAKAESLDAIGEAIAENGRVIVTGCMGVEEGTIRDVHPSVLAVTGPQQYEQVVNAVHE
VVPPRADHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPVGEV
LSEAERLVKSGVKELLVISQDTSAYGVDIKYRTGFWNGRPVKSRMTEMCEALSELGVWVR
LHYVYPYPHVDELIPLMAEGKILPYLDIPFQHASPKVLKAMKRPAFEDKTLARIRKWREI
CPELTIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPAEALGLEAVPD
EIKQDRWDRFMAHQQAISTARLQLKIGKTIQVLIDEVDEEGPIARSMADAPEIDGNVYID
SDEPLQPGDIVSVRVTAADEYDLWAELV
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaccgcgacccccaccaagaacagtgcccccagtgtaggattcatatcactt
gggtgcccgaaagcgctcgtagactccgaacgcatcctcacccagctgcgcactgaaggc
tatcaggtagtgccgacctatgagggcgcggatgtggtggtggtcaatacctgtggcttc
atcgactcggccaaggcagaatccctggacgccattggcgaggcgattgccgagaacggt
cgggtcatcgtcaccggttgcatgggtgtcgaggaagggaccattcgcgatgtgcatccc
agcgtgctggcagtaaccggcccgcagcaatacgaacaggtagtcaatgctgtgcacgaa
gtcgtgccgccgcgggctgatcacaatccgctgatcgacctggtaccgccacagggcgtc
aagctgaccccccggcattacgcctatctgaagatttccgaaggctgtaatcacagctgc
agtttctgcatcattccttccatgcgtggcaagctggtcagccgcccggtgggcgaggtt
ctgagcgaagccgagcgtctggtcaagtcgggcgtcaaggagctgctggtcatctcccag
gacaccagcgcttatggtgtggatatcaagtaccgcaccggtttctggaatggccgcccg
gtgaagtcacgcatgactgaaatgtgcgaggcgctcagcgaactgggcgtctgggtgcgg
ctgcactatgtgtacccctacccgcacgtggatgagctgatcccgctgatggccgagggc
aagatcctgccgtatctggatattcccttccagcatgccagcccgaaagtgctcaaggcg
atgaagcgccctgccttcgaagacaagaccctggcccgtatccgcaagtggcgcgagatc
tgtcccgagctgaccatccgctcgaccttcatcgtcggcttccccggcgaaaccgaggaa
gatttccaatatctgctcgactggctgaccgaagcgcagctcgaccgcgtcggctgcttc
cagtattccccagtggagggcgctcccgccgaagcactgggcctggaagctgtgccggac
gagatcaagcaggaccgctgggaccgtttcatggcccaccagcaggccatctctaccgct
cgcctgcagctgaagatcggcaagaccatccaggtgctcattgatgaggtggacgaggaa
ggccccatcgcccgctccatggccgatgcgccggaaatcgatggcaacgtttatatcgac
agcgatgagccgctgcagcccggcgacatcgtcagcgtgcgggtcaccgccgccgacgaa
tatgatctctgggcagagctggtctga
DBGET
integrated database retrieval system
