Halopseudomonas sp. SMJS2: QAO71_10260
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Entry
QAO71_10260 CDS
T10383
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
hasm Halopseudomonas sp. SMJS2
Pathway
hasm02020
Two-component system
hasm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hasm00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QAO71_10260
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QAO71_10260
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hasm03021
]
QAO71_10260
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hasm02035
]
QAO71_10260
Transcription machinery [BR:
hasm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QAO71_10260
Bacterial motility proteins [BR:
hasm02035
]
Flagellar system
Flagellar assembly proteins
Stator
QAO71_10260
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
Motif
Other DBs
NCBI-ProteinID:
WGK63272
LinkDB
All DBs
Position
complement(2191722..2192432)
Genome browser
AA seq
236 aa
AA seq
DB search
MYARTMGVANEQDRLVQQFAPLVKRIAYHMLARLPASVQVEDLIQAGMLGLLEAARKFDH
GKGASFETYAGIRIRGAMLDDVRKGDWAPRSVHRNTRLVSSAIRAVEAKVGRDAKDHEVA
AELDMSLEDYYAILNDTAGSRLFSFEDLLEAGAPAEVGSDHEALDGVEDERFRKALAEAI
GRLPEREQLVLSLYYDEELNLKEIGAVLGVSESRVSQLHSQCAARLRARMADWRDD
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcgcgcaccatgggcgtggccaatgagcaggaccgcctggtgcagcagttcgcg
ccgctggtcaagcggattgcctaccatatgctggcgcgcctgccagccagcgtgcaggtg
gaagacctgatacaggccggcatgctgggcctgctggaggctgcacgcaaattcgatcat
ggcaagggtgccagcttcgagacctatgctggtatccggatccgtggcgccatgctggat
gatgtgcgcaagggtgattgggccccccgctcggtccaccgtaacacccgcctggtcagc
agcgcgatccgcgccgttgaagcaaaagtaggtcgtgacgctaaagatcacgaggttgct
gccgaattggatatgagcctcgaagattactatgcgattctcaacgacacggccggcagt
cggctgttcagcttcgaagatctgctggaggccggggcgccggccgaagtcggctctgac
catgaagccctcgacggagtggaggatgaacgttttcgcaaggcgctggccgaggcgata
ggtcggttgcccgagcgcgagcaactggtgctgtcgctgtattacgatgaggaactgaac
ctcaaggagatcggtgcggtgctcggcgtcagcgagtccagggtcagtcagttgcacagc
caatgtgccgcccgcctgcgcgcacggatggccgattggcgcgacgattga
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