KEGG   Halopseudomonas sp. SMJS2: QAO71_16620
Entry
QAO71_16620       CDS       T10383                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
hasm  Halopseudomonas sp. SMJS2
Pathway
hasm02020  Two-component system
Brite
KEGG Orthology (KO) [BR:hasm00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    QAO71_16620
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:hasm02022]
    QAO71_16620
Two-component system [BR:hasm02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   QAO71_16620
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 AAA_2 HTH_8 HTH_50 FleQ AAA AAA_16 HTH_10 HTH_43
Other DBs
NCBI-ProteinID: WGK61644
LinkDB
Position
3557696..3559090
AA seq 464 aa
MTSDNSIGNHIQVVLIDDDAHLRQALSQTLDLAGLKVLSLGDANGLATRIPHDWPGVLVS
DIRMPGLDGLQLLQQLHEQDAELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFANDTLLD
SVRRALAVRQLVLDNRSLRLALADRQELAGRLIGQSPAMRRLHEQIGALAGINSDVLILG
ETGTGKEVVARALHDLSSRRNGPFVAINAGALAESVVESELFGHEPGAFTGASRRRIGKF
EFANGGTLFLDEIESMSLEVQVKLLRLLQERVVERLGGNQSIALDIRVIAATKEDLRQAA
DQGRFRADLYYRLNVAPLRIPPLRERGEDPLLLFQHFAMGASSRHGLPTRELPAGQRAML
LRHAWPGNVRELQNAAERFALGLDLELEPGQEGLTDSAALSGNLGVQVEAFERALIAAEL
DHPHNSLRSLAEALGIPRKTLHDKLRKHGLSFTPVGGSSPEDLD
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgaccagcgataacagtatcggtaaccatatccaggtggtgctgatcgacgatgacgcc
catctgcgccaggcgctcagccagaccctcgacctggccgggctcaaggtcctcagcctt
ggcgacgccaatggcctggctacgcgtattccgcatgactggccgggtgtgctggtcagc
gatatccgcatgcccggcctcgacggcctgcaattgctgcaacagctgcatgagcaggac
gccgaactgccagtgctgctgatcaccggccacggcgacgtccccctggcggtccaggcc
atgcgcgccggtgcctacgactttctggaaaagcccttcgccaacgacaccctgctcgac
agcgtgcgccgtgccctggctgtgcgccaactggtgctggacaaccgcagcctgcgcctg
gcgctggctgaccgccaggaactggctggccggctgatcggccagtcaccggccatgcgc
cgcctgcatgaacagataggtgccctcgccggcatcaacagcgatgtgctgatcctcggc
gagactggcaccggcaaggaagtggtcgcccgtgccctgcatgacctgtccagccgccgt
aacggtccctttgtcgccatcaatgccggcgccctggccgagtcggtggtggaaagcgag
ctgttcggtcacgagccgggggcttttaccggcgcttcgaggcgccgtatcggcaagttc
gaattcgccaacggcggcaccctgtttctcgacgagatcgagagcatgagcctggaggta
caggtcaagctgctgcgcctgttgcaggagcgggtggtcgagcgcctgggcggtaaccag
tcgatcgcgctggatatccgcgtgattgccgccaccaaggaagacttgcgccaggccgcc
gaccagggccgcttccgcgccgacctgtattaccggctgaacgtcgcccccctgcgtatt
ccaccgctgcgcgagcgcggcgaagatccgctgctgctgttccagcatttcgccatgggc
gccagcagccgccatggcctgcccacccgcgagttgccggccggccagcgcgccatgttg
ctacgtcatgcctggccgggcaacgtgcgcgagttgcagaacgccgctgaacgcttcgcc
ctgggcctggaccttgaactggaaccgggtcaggagggcctgaccgacagcgccgcactc
agtggcaacctcggcgtgcaggtcgaggccttcgagcgcgccctgatcgccgccgaactg
gaccatccacacaattccctgcgcagcctcgccgaggctctcggcatcccgcgcaaaaca
ctgcacgacaaactgcgcaagcacgggctgagcttcacaccggttggcggaagctcgcca
gaggacctcgactga

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