Halomonas sp. 'Soap Lake #7': B2G49_02545
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Entry
B2G49_02545 CDS
T09182
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
haso
Halomonas sp. 'Soap Lake #7'
Brite
KEGG Orthology (KO) [BR:
haso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
haso03009
]
B2G49_02545
Enzymes [BR:
haso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
B2G49_02545
Ribosome biogenesis [BR:
haso03009
]
Prokaryotic type
rRNA helicases
B2G49_02545
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AQU81582
LinkDB
All DBs
Position
625833..627230
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AA seq
465 aa
AA seq
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MSDTSFASLALSSALLTNLDSLGYHEMTPVQAQSLPPMLAGRDVLAQAKTGSGKTAAFGL
ALLAELRVEAFAVQGLVLCPTRELADQVADELRRLARGMPNVKVLTLCGGAPFGPQLGSL
EHGAHIVVGTPGRIDEHLRKGSLTLGSLTTLVLDEADRMLDMGFQATIDDIIADTPADRQ
TLLFSATFPDEQASGGLATMTRGVMRDPVTVKVAELHDATTIDQHFYEVANEEARFAALQ
QLLLVYRPATSVVFCNTKRETQAVAEQLVDAGFSAVALNGDLEQKDRDRRLILFANQSAS
ILVATDVAARGLDIAQLDAVFNYQIARELDVHVHRVGRTGRAGASGVACTLVTPKEHYRL
ERLEGLLEQPIATEPLPKPQSLVPFEPPMATLQLAGGKKDKLRPGDILGALTSEGGLRGD
QVGKIKVLARSAYVAVECSVVQKAQAKLERDKLKGRAFRVRRIRY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgacacctcttttgcatcgcttgcgctctcatctgcgctgctgactaatctagac
tcccttggctatcacgaaatgacgccggttcaggcgcaaagtctgccgcctatgctggcg
ggccgcgatgtgctggcccaggccaaaaccggttcaggaaagacggctgcatttggcctg
gcgctgctggcagagctgcgcgtcgaggccttcgccgtgcagggcctagtactgtgtccc
actcgggaactagccgaccaagtagcagatgaactgcgacgtttggcgcgggggatgccc
aacgtcaaggtgctaaccctgtgtggtggcgcgccgtttggtccacagcttggctcgtta
gaacacggtgctcacattgtagtgggcacgccagggcgtattgacgagcatctacgaaaa
ggctcgctaacgctggggtcgctgacgacgctggtactggatgaagctgaccgtatgctg
gatatgggcttccaggcgacgattgatgacatcattgctgatacccccgctgaccgccaa
acgttgctgtttagtgcgacgttcccagacgagcaggcctctggtggccttgccaccatg
acccgcggcgtcatgcgtgatccggtcacggttaaagtggcggagcttcacgatgccact
acaattgaccagcacttctatgaagttgccaatgaagaggcgcgttttgctgcccttcaa
caactgctgctggtctatcggccagcgactagtgtggtgttctgcaataccaaacgcgaa
actcaggcggtggcagagcaactggtcgatgccgggtttagcgctgtggcgctcaacggt
gatctagagcaaaaagatcgtgaccgacggttaatcctgtttgccaaccagagcgcatct
attctggtggctactgatgtcgctgctcgtggtttggatattgcccaactagatgccgtg
tttaactaccaaatagcccgtgaacttgatgtccatgtccatcgggtagggcgcactggt
cgtgcaggggctagcggtgttgcctgtacattggtgactcctaaagagcattaccggcta
gaacggctagaaggacttctggagcaaccgattgccacagaacctttgcctaaaccccag
agcttagtgccatttgagccccccatggctacgctacaacttgctggtggtaaaaaagat
aagctgcgtcctggtgatatcctgggtgctttaaccagcgaaggtggcctgcgtggtgat
caggttggaaaaattaaagtgttggcgcgtagcgcctatgtggcagtggagtgcagtgtt
gttcaaaaagctcaggccaagcttgaacgtgacaaactaaaagggcgcgctttccgcgtt
cgccgtattcgttattga
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