Halomonas sp. 'Soap Lake #7': B2G49_03190
Help
Entry
B2G49_03190 CDS
T09182
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
haso
Halomonas sp. 'Soap Lake #7'
Brite
KEGG Orthology (KO) [BR:
haso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
haso03016
]
B2G49_03190
Enzymes [BR:
haso01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
B2G49_03190
Transfer RNA biogenesis [BR:
haso03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
B2G49_03190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
DUF1822
Motif
Other DBs
NCBI-ProteinID:
AQU85060
LinkDB
All DBs
Position
complement(760071..762011)
Genome browser
AA seq
646 aa
AA seq
DB search
MLQNNSLLAQLKQQIRQTTPRAEGVIKATEKGFGFLETDSGESYFVPPPAMKQVLHGDRV
EAVIHENGDKKSVEPEKLIEAGLDRFVARVQKREDRLAVVPDHPSIRNALKARIKNSLDE
ATIADGDWVVARLVRHPLKENDRGFFTQIDELVAKADDPAVPWRVTLARHALEQDCPEAG
SEWPLIDEGLPREDLTALPFFTIDGEKTRDMDDALHIATRAEGGWQMSVAIADPTAYVTE
NHAADLEARTRAFTVYLPGQNVTMLPEQLADDLCSLWEGQERPALACTLDINADGSLGDY
RFFAANVKSHAKLVYDSVSDWIEGQGDWAPADDIAEQLTALRDLTEARTAWRNEHALVFK
DRPDYVFDLDDAGNVLGVRTEDRRIANRMIEESMIAANACCADFLAQHIGHGIFNVHRAF
EPDKAEAAQEFLAGQQIEVAQEALTELAHYKELKRALESRDDAWLDARLRRFQGFTSMSA
QPGPHFGLGLPAYATWTSPIRKYGDMVNHRLIKRVLKGEQAPAEASQQLTEQLTERRRLN
RMAERDVKDWLYVRYLTPAAQKQDTFEAEIMAINRGGMRVRLIDNGATAFVPAPLMHSDR
DKVVIDDKEGRIQIEGEERYKLGDSLRVALTEAREETRSLVARPAA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaaacaattccctgcttgcccagctcaagcaacagattcgtcaaaccacccct
cgcgctgaaggggtgatcaaagccaccgaaaaaggttttggttttctagaaaccgatagc
ggtgaatcctactttgtgccgccacccgctatgaagcaggtcctgcatggtgaccgcgtt
gaagcggtgattcatgaaaacggcgacaagaagtccgttgaacccgaaaagctaattgaa
gctgggcttgaccgctttgttgcacgggtgcaaaagcgcgaagaccgtcttgcagtagtg
ccagaccacccctccattcgtaacgcgcttaaggcgcgcattaagaacagcctagatgaa
gccaccattgcggatggcgactgggttgttgcacgactggtgcgccacccgctcaaagag
aacgaccgtggcttcttcactcagattgatgaattggtcgctaaagccgacgaccctgcc
gtgccatggcgcgttaccctagcccgccatgcgcttgagcaagattgcccagaggcaggc
agcgagtggccattaatcgatgaggggcttccgcgggaagaccttacagcactccccttc
ttcaccattgatggtgaaaagacccgtgatatggacgacgctctgcatattgctactcgc
gctgaaggcggctggcagatgagcgtagccattgccgaccctacggcttatgtcacagaa
aaccacgcggccgatctggaagcgcgtacccgcgcctttaccgtttacttgccaggccaa
aacgtcaccatgttgcctgagcagttggccgatgacctttgttcactctgggaaggccaa
gagcgtccagccttagcctgcacgctagatattaatgccgacggcagcctaggcgattac
cgtttctttgccgctaacgtaaaatctcacgctaagctcgtttatgacagcgtatctgat
tggatcgaaggtcaaggcgattgggcgccagcagatgatattgctgagcagcttaccgcc
ctacgtgatttgaccgaggcgcgtaccgcttggcgtaatgagcacgcactggtgttcaaa
gatcgcccagactacgtcttcgacttggacgatgcgggtaacgtgctgggtgttcgcaca
gaagatcggcgcattgccaaccgcatgattgaagagtcgatgattgctgctaacgcttgc
tgtgccgacttcctcgcccagcatattggtcacggcatcttcaacgtacaccgcgccttt
gagccagacaaagctgaagcagctcaagagtttctggctggccagcagattgaagtcgcg
caggaagcactgaccgaactggcccactacaaagagctgaaacgcgccttagagagccgc
gatgatgcctggttggatgctcgactacgccgcttccagggcttcactagcatgtcagcc
cagcctggcccacactttggactagggttgccagcttacgccacctggacatcgccgatt
cgtaagtatggcgatatggtcaaccaccgtttgattaagcgcgtactgaagggtgagcag
gctcctgcggaagctagccagcagctcaccgagcaacttaccgaacgccgtcgcctaaac
cgcatggctgagcgcgacgtaaaagactggctctatgtgcgctatcttactcccgctgct
cagaagcaggatacctttgaggcagaaatcatggcgattaatcgcggtggtatgcgggta
cgcctgatcgacaatggtgcaacagcctttgtaccagcgcctttaatgcacagcgaccgc
gacaaagtggtaattgatgacaaagagggccgcattcagattgaaggcgaagagcgctac
aaactaggtgatagcctacgcgtagcactcactgaagcccgcgaggagacccgctcgctg
gtggcccgccccgctgcctaa
DBGET
integrated database retrieval system
