Halomonas sp. 'Soap Lake #7': B2G49_04070
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Entry
B2G49_04070 CDS
T09182
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
haso
Halomonas sp. 'Soap Lake #7'
Pathway
haso03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haso00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B2G49_04070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haso03019
]
B2G49_04070
Messenger RNA biogenesis [BR:
haso03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B2G49_04070
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
Motif
Other DBs
NCBI-ProteinID:
AQU81846
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Position
951700..952194
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AA seq
164 aa
AA seq
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MIDADGFRPNVGIIIANSQGQLLWARRVGQNAWQFPQGGIKASETPQQALFRELHEEIGL
TADDVDIVACTRGWLRYRLPRRMIRTHSRPVCIGQKQKWFLLKIRCQENRICMTATPKPE
FDGWRWVSYWYPLGQVVPFKREVYRRALRELSPRVQRLAQDNEG
NT seq
495 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgctgacggctttcgccccaatgttggcattattattgccaatagccagggg
cagctgctttgggcgcgtcgtgtaggacaaaatgcgtggcaattcccccagggaggcatt
aaagcaagtgagactccacaacaagcgctttttcgtgaacttcacgaagagatcggtcta
accgccgacgatgttgatattgttgcctgcacccggggctggctgcgctaccgtcttcca
cgacgcatgattcgtacccactcgcgaccggtctgtattggtcagaagcaaaagtggttt
ttacttaagattcgctgtcaagagaaccgaatctgcatgacggccacgcccaagccagag
tttgatggctggcgttgggtaagctactggtaccctttggggcaagtagtaccgtttaaa
agagaggtatatcggcgcgcgctgcgagagctttctccacgtgtacagcgtctagcacaa
gataacgaaggataa
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