Halomonas sp. 'Soap Lake #7': B2G49_06560
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Entry
B2G49_06560 CDS
T09182
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
haso
Halomonas sp. 'Soap Lake #7'
Pathway
haso00250
Alanine, aspartate and glutamate metabolism
haso00310
Lysine degradation
haso00350
Tyrosine metabolism
haso00650
Butanoate metabolism
haso00760
Nicotinate and nicotinamide metabolism
haso01100
Metabolic pathways
haso01120
Microbial metabolism in diverse environments
Module
haso_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
haso00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
B2G49_06560 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
B2G49_06560 (gabD)
00310 Lysine degradation
B2G49_06560 (gabD)
00350 Tyrosine metabolism
B2G49_06560 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
B2G49_06560 (gabD)
Enzymes [BR:
haso01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
B2G49_06560 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
B2G49_06560 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
B2G49_06560 (gabD)
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GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AQU82289
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Position
1515923..1517380
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AA seq
485 aa
AA seq
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MEALKETQLYCPFAYIDGSWVAADSGEQINVINPATGEPVGDIPRLGRAETERAIDAADA
ALPAWRSLTAQERADLLLKWHDLMLEHQHDLALLMTYEQGKPIKESAGEIAYAASFLRWF
AEEARRVYGETIPAAKATQRIVVTKQPVGVVGAITPWNFPAAMITRKAGAALAAGCTIVV
KPASQTPFSATALALLAERAGIPRGVFNVVPGNASEIAKALTQSPKVRKITFTGSTEVGR
KLMAQAAEHVQKISLELGGNAPFIVFEDADLDAAVEGAMAAKFRNAGQTCVCTNRFLVQS
SVINAFCEKLAVAMNSELRVGDGTKPDVNIGPLIDENAVKKVSEHVQDAIDNGAELLLGG
HPHPLGGNFFTPTLISFATDKMKVAHEETFGPLAAVFPFDDEETAIEMANDTEYGLASYF
YSRDLARVWRVAEALEYGMVGINTGLISNAAAPFGGVKASGLGREGGHQGLEEYLETKYL
CIDLG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgctgaaagaaacacagctgtattgcccctttgcctatatcgacggtagttgg
gtggccgccgacagcggtgagcaaatcaacgttataaatccggcaacgggggaaccagtt
ggtgacatcccacgactaggcagggctgaaacagagcgggccattgatgctgcagatgct
gccttgccagcatggcggtcgttaactgcgcaggaacgcgctgacttgctgcttaagtgg
catgatctaatgcttgagcatcagcacgatcttgcgctgttaatgacgtatgagcagggc
aagccgattaaagagtcggcaggggaaattgcttacgctgcaagctttctccgttggttc
gcagaagaggctagacgtgtttatggcgagacgattcctgctgctaaagctactcagcgt
atcgtagtgaccaagcaaccggtgggcgtagtgggggctatcactccgtggaacttccca
gccgccatgattacacgcaaggcaggtgctgctttggcagccggttgtacgatagtcgtt
aagcccgctagccaaacaccgttttcggccacggcacttgcgctgctcgctgagcgggca
ggaatcccacgcggtgtttttaatgtcgtgccggggaatgcgtctgaaatagccaaggct
cttacacagtcacctaaagtccgcaaaatcacctttacagggtcaacagaggtggggcgt
aagttgatggcccaagcggccgagcatgtgcaaaaaatatcgctggaacttggtggtaac
gcaccatttattgtttttgaggatgctgacctggatgcggctgtggaaggcgcgatggct
gccaagtttcgcaacgcaggtcaaacctgtgtgtgtaccaatcgttttctagttcaatcc
agcgtaattaatgccttttgtgaaaagcttgctgtggccatgaatagtgagctcagggtg
ggtgatggcactaaacctgatgtcaatatcgggccgctgattgatgagaacgctgttaaa
aaagtaagtgagcatgtccaggatgctatcgataacggcgccgagcttctattgggtggc
cacccccatccgctaggcggtaattttttcacgcccacactcatcagttttgctaccgat
aagatgaaagtggcgcacgaggagacctttgggcctctggcggcggtgtttccttttgat
gatgaagaaacagccattgagatggctaatgacaccgagtatggcttggcttcctacttt
tactcgcgtgacttggcacgtgtttggcgtgtcgctgaagcgcttgagtacggtatggta
ggcattaatacaggacttatttccaatgcggctgcacctttcgggggtgtaaaagcctct
gggcttggtcgtgagggtgggcatcaaggattggaggaatatttagaaaccaaatacctg
tgtattgatctgggttaa
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