Halomonas sp. 'Soap Lake #7': B2G49_08750
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Entry
B2G49_08750 CDS
T09182
Name
(GenBank) DNA topoisomerase I subunit omega
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
haso
Halomonas sp. 'Soap Lake #7'
Brite
KEGG Orthology (KO) [BR:
haso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haso03032
]
B2G49_08750
03400 DNA repair and recombination proteins [BR:
haso03400
]
B2G49_08750
Enzymes [BR:
haso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
B2G49_08750
DNA replication proteins [BR:
haso03032
]
Prokaryotic type
DNA Topoisomerases
B2G49_08750
DNA repair and recombination proteins [BR:
haso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B2G49_08750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AQU82684
LinkDB
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Position
complement(1973891..1976518)
Genome browser
AA seq
875 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGNDFIVKSSVGHIRDLPTSGSGKAASDPQERARQAAATR
KMSVEEKAEYKQRKAQDQLIRRMGIDPDNGWKARYEVLPGKEKVVAELKKLAEKADAVYL
ATDLDREGEAIAWHLRETIGGDNSRYKRVVFNEITKNAIQDAFKDPGTLNIPRVEAQQAR
RFLDRVVGFMLSPLLWAKVARGLSAGRVQSVAVRLIVEREREIRAFIPEEFWDVHADLVS
PDGELVRFALARQDGKAFRPTSEKDTLDRIAALRKAKLEITSREDKPTSSKPTAPFITST
LQQAASGRLGFSVKKTMTMAQRLYEAGYITYMRTDSTNLSKDAVESVRSFIGDEYGARYL
PEAPNRFSSKESAQEAHEAIRPSSVERKATDLSGMERDAERLYELIWRQFVACQMTPAEY
LSSTLSVEVDGYDLRAKGRVLKFDGYTRVMKPSGKNEDQSLPDLPKGTPMGLEKLDPQQH
FTKPAPRYTEASLVKELEKQGIGRPSTYASIISTIQDRGYVKLENRRFYAEKLGDIVTER
LKESFPDLMDYSFTARMEDSLDEVAEGERNWQALLDAFYEEFRVELSKAESDDGMRPNQP
VSTDIDCPSCGRKMQIRTASTGVFLGCSGYNLPPKERCKTTIDLIPGEEAVAEDAGEEAE
TDALRAKRRCSKCGTAMDNYLIDETRKLHICGNSPDCDGYDIEFGKFKIKGYDGPVIECD
KCGSEMQLKSGRFGKYFGCTNSECKNTRKLLKSGEVAPPKMDPIPMPELACQKVDDHYVL
RDGASGLFLAASKFPKNRETRPPLVKELKSHAKELPEKYHFILDAPSEDPDGRPAQIRYS
RKNKEQYVMTDEDGKATGWKATFEAGKWHVEDKRK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgggcaagtcactggtcatcgtcgaatcgccagcgaaagcgaagacgataaataagtac
ctcggcaacgatttcatcgtgaagtcgagtgtgggtcacatacgtgatctgccgaccagc
ggctcaggcaaggcagcctccgatccccaggagcgcgcgcgccaggccgcggcaacgcgt
aaaatgtccgtggaagagaaagcggagtacaagcagcgcaaagcccaggaccagttgata
cgccgcatgggtattgacccagacaatgggtggaaagctcgttacgaagtattgcccggg
aaagagaaggttgttgctgagcttaaaaagctggcagaaaaggccgacgctgtttatctc
gcaacggatttggatcgcgaaggagaagccatcgcttggcatctacgcgaaaccattggt
ggtgataatagccgctataagcgtgtggtttttaatgaaatcactaaaaatgctattcaa
gatgccttcaaagaccctgggacgctcaatattccccgtgtcgaagcacagcaggccagg
cgctttttagatcgtgtcgtgggctttatgctttcgccgttgttgtgggctaaagttgct
cgcgggctttctgctggacgtgttcagtcggtggctgtgcgcctaattgtcgaacgcgaa
cgtgaaattcgtgcgtttatcccagaggagttttgggatgtccacgccgacttggtttcc
ccagatggcgaactggttcgctttgcgctggcgcgacaggatggtaaagcattccgtcca
acgtcagaaaaagacacccttgaccgtatcgcagcgctgcgcaaggctaagcttgaaatc
acctcgagggaagacaagccaaccagttccaagccaacggcaccgttcatcacctcgacg
cttcagcaggcagcgagtggtcggttaggcttttcagttaagaaaaccatgaccatggcc
cagcgtctctatgaagcgggctatatcacctacatgcgtactgactccacgaatctttca
aaagatgcagtggagagtgtgcggtcgtttattggtgacgagtatggtgcgcgctacttg
ccagaggcgccgaaccgttttagcagtaaggagagtgcccaagaggcccatgaggcgatc
cgaccatccagtgttgagcgtaaagcgacggatctgtcgggtatggagcgtgacgctgaa
cggctttacgaacttatttggcgccagtttgtggcttgccaaatgacacctgctgagtac
ctgtccagcacgttaagtgtcgaagtggatggttacgatctgcgtgccaaaggacgcgtg
ctgaagtttgatggctacacccgagtgatgaagcccagcggaaagaacgaagaccaaagc
ctacccgacctgccaaaaggcacgccgatggggctggaaaaacttgatccacagcaacac
tttaccaagcctgctccgcgctacacggaggcaagtttggtaaaagagttagagaaacaa
ggtattggccgaccatctacctatgcgtcaattatctccacgatccaggaccgtggttat
gtaaagttagaaaaccggcgcttttatgctgaaaagttgggtgacatcgttactgagcgc
ctaaaagagtcctttcctgatcttatggactactctttcacagcgcgcatggaagatagt
ctggatgaagtggctgaaggcgaacgcaactggcaagcgttgttggatgctttttacgaa
gagtttcgtgttgagctaagcaaggctgaaagtgacgacggtatgcgtcctaatcagccg
gtgtccactgatatcgactgcccaagctgcggtcggaaaatgcagattcgtacggcatct
actggggtgtttcttggctgcagtggctacaacttgccccctaaagagcgctgcaaaacc
actattgatctaattcctggtgaagaagcggtcgccgaagatgctggcgaagaggctgaa
accgatgcattgcgggccaaacgccgttgttcaaagtgtggcactgcgatggataactac
ctgattgatgaaacccgcaaactgcatatttgtggtaatagccccgattgcgatgggtac
gatattgaattcggtaagttcaagatcaaaggctacgatgggccggtcattgagtgcgac
aagtgtggctcggagatgcagctcaagtctggtcgttttgggaaatactttggctgcacc
aatagcgagtgtaaaaatactcggaaactattgaaaagtggcgaagtagcaccgcctaaa
atggatcctatccccatgccggagcttgcctgccaaaaggtggatgaccattacgtgctg
cgcgatggcgccagtggtttgttcttggcagccagcaagtttcctaaaaaccgagaaacg
cgtccgccattggtaaaagagttaaagtcgcacgccaaggagctgcctgagaagtaccac
tttattctcgatgcgcccagtgaagacccagatggacgccccgcgcaaattcgttactcg
cgtaagaacaaagagcagtatgtgatgaccgacgaagatggcaaagctactggctggaaa
gcaacctttgaagccggtaaatggcatgtggaggataagcgtaagtga
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