Halomonas sp. 'Soap Lake #7': B2G49_13865
Help
Entry
B2G49_13865 CDS
T09182
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
haso
Halomonas sp. 'Soap Lake #7'
Pathway
haso03030
DNA replication
haso03430
Mismatch repair
haso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
haso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
B2G49_13865
03430 Mismatch repair
B2G49_13865
03440 Homologous recombination
B2G49_13865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
haso03032
]
B2G49_13865
03400 DNA repair and recombination proteins [BR:
haso03400
]
B2G49_13865
Enzymes [BR:
haso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
B2G49_13865
DNA replication proteins [BR:
haso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
B2G49_13865
DNA repair and recombination proteins [BR:
haso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
B2G49_13865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
tRNA_anti_2
Herpes_IR6
Motif
Other DBs
NCBI-ProteinID:
AQU83559
LinkDB
All DBs
Position
complement(3028318..3031821)
Genome browser
AA seq
1167 aa
AA seq
DB search
MTVPFVHLRLHSEYSLVDGLVKIKSLVSTTAERGMPALALTDEANLFGLVKFYKAAQGAG
LKPIIGSDLWLHNPHDDAHPYRITLLAMNDVGYRNLTELISKGWTHGQRQGRAILEKQWV
LEQSDGLIALSGARDGEIGRHLLSDHEREARVLLEEWQAAFPERFYLELVRTGRPLEEDC
VHASVKLAIETGTPVVATNDVRFLERDDFWAHETRVAIGEGKALDDPRRERRYTEEQYLK
SPEEMAALFADIPEALENSVMIAQRCSVDVRLGEIFLPEFEIPEGMTQDEFFRKVSHDGL
TDRLDFLFPAERYPRDSDEYKAIDQRYRERLDFELNVIIQMGFPGYFLIVMDFIQWAKDN
NVPVGPGRGSGAGSLVAYAQKITDLDPIGYDLLFERFLNPERVSMPDFDVDFCMEKRDKV
IEYVADRYGRNAVSQIVTFGTMAAKAVVRDVARAQGRPYSLGDKLSKLIPFEVGMTLAKA
IEQEPALKEFIGNDEEAEEIWEMALKLEGTTRGTGKHAGGVVIAPTKLTDFSPLLCDEDG
SGLVVQFDKNDIEEAGLVKFDFLGLRTLTIIDWALKMVDKVRSANGQGALNIDAIPLDDS
KTFEMLKRAETTAVFQLESRGMKELIKRLLPDSLDDMIALVALFRPGPLQSGMVDDFINR
KHGRAEVSYPHPDYQHELLKPVLSPTYGIILYQEQVMQIAQVMAGYTLGQADMLRRAMGK
KKPEEMAKQRSGFMEGCAANGIDKDLAGNIFDLVEKFAGYGFNKSHSAAYALVSYQTAWL
KAHYPGPFMAAVMSTEMDNLDKVVPLIEECRNLKLTVTPPDVNVGGYKFTVDTEGRVVYG
LGAIRGVGEGPIGAIVEARSADGPFKDLFDFCRRLDPKRMNKRTLEALIRSGALDTLGPN
RAVLAAAMEDALKAAAQNHANQNLGMLDMFGDAFAAEEEESDAYAEYRHAREWTDRERLS
GEKDTLGLYLTGHPIDEYERELKRFVSTRISDLKPSREPQRVAGLVVAMRTMKSKRGDTM
AFITLDDRTGRIEASLFGDVFEQLRGQIESDQVIIVEGEVSNDDFSGGLRLRGKDVTPMV
TARIRYGQAVELALDAGQINGRLVESLRDSLTPYRDAAGLPVRLQYRHPDAVAWLELADE
WKVAPSDDLLLALRDVQGQAGVQLRYR
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgacggttccgttcgttcatctacgtttgcacagtgaatactccctggtcgatggcttg
gttaaaatcaagtcgctggtcagtaccaccgcagagcgtgggatgccagcgcttgcgcta
accgacgaggcaaacctgtttggcctggtaaagttttacaaagctgcccagggtgcgggc
cttaaacccattattggcagcgacttgtggctccataatccgcatgatgacgctcacccg
taccgcattacgctgttagcgatgaacgacgttggctaccgtaaccttaccgagctgatc
tcaaaaggctggacccatggtcagcgccaaggtcgcgctatactcgagaaacagtgggtg
ctggaacagagtgatggcttgattgcgctttccggggcgcgagatggcgagattggtcgt
cacttactatctgaccatgagcgtgaagcgcgtgtgctgcttgaggagtggcaagccgcg
tttcctgagcgtttttatttagagctagttcgcacgggacgcccattggaagaggactgc
gttcatgccagcgttaaactggccattgaaacaggcactccggtggtggctaccaatgac
gtacgctttttggagcgcgacgatttttgggcccacgaaacccgtgtggcgattggtgaa
ggtaaggcgctggacgacccccgtcgtgagcgtcgctacactgaagagcagtaccttaaa
agccctgaagagatggcagcgctgttcgctgatattcccgaggcgcttgaaaacagtgtg
atgatcgcgcagcgttgtagtgtagatgtgcgtttaggtgaaatcttcctgcctgaattc
gaaattcccgaaggcatgacccaggatgaatttttccgtaaggtttcccacgacggctta
acagatcgactcgattttctattccccgctgagcgctatccccgcgacagtgacgaatac
aaggcgattgatcagcgttaccgcgagcggctggatttcgagctcaacgtcattatccag
atggggttccctggctatttcctgatcgtaatggactttatccagtgggctaaagataac
aacgtgcctgtaggaccggggcggggttcgggtgccggttcactagtggcttatgcacaa
aaaatcaccgatttggacccgattggctacgatctgctgttcgaacgctttcttaaccct
gagcgtgtctccatgcccgacttcgacgtcgacttctgcatggagaaacgcgataaagtg
atcgagtatgtggccgaccgttatggccgcaacgcggtgtcccagattgtcacctttggc
accatggccgccaaggcggtagtgcgtgatgtcgcccgtgcccaaggtcggccctattcg
ctgggcgataagctctccaagctgattccttttgaagtgggcatgacccttgccaaagcg
attgagcaagagcctgctctgaaagagtttatcggtaacgacgaagaggctgaagagatc
tgggagatggccctcaagcttgagggcactacccgaggtaccggtaagcacgctgggggc
gtggtgattgcgcccaccaaactgaccgatttttcaccgctattgtgtgatgaagatggc
tctggcctagtggttcagtttgataaaaatgacattgaggaagccgggctggtgaagttc
gacttccttggtctgcgtacgctaacgattatcgactgggcactaaaaatggtcgataag
gtacgtagtgccaatggccagggggcgctcaatatcgacgccattcctctggatgatagt
aaaaccttcgagatgctcaagcgggcggaaaccaccgctgtattccagcttgaatcccgc
ggtatgaaagagctgattaagcgcctgctacccgactcgctagacgatatgatcgccctg
gtggccctgttccggcctgggccgctgcagtcgggcatggtagatgactttatcaaccgt
aagcacggccgcgcggaagtctcttacccacacccggattatcagcacgagttattgaag
ccggtgctaagccccacctacggcatcattctgtaccaagagcaggtaatgcagatagcc
caggtaatggctggctacaccctggggcaggcggacatgctacgccgtgccatgggtaag
aaaaagcctgaagagatggccaaacagcgctcgggctttatggaaggttgtgccgccaac
ggcatcgataaagatttagcgggcaatatcttcgatctggtagagaagttcgccggttac
ggttttaacaaatcgcactccgctgcctacgcccttgtatcgtatcaaaccgcttggctg
aaggctcactatccagggccgtttatggcagcggtaatgtccacggaaatggacaactta
gataaagtggtgccgctaattgaggagtgccgcaaccttaagctcaccgtgacaccaccg
gatgtcaacgtcggtggctacaagttcaccgtagataccgaaggccgtgtggtatatggc
ttaggcgctattcgtggtgttggcgagggcccgattggcgccattgtggaagcccgtagc
gctgacggcccattcaaggatctgtttgatttctgtcgccgcctcgaccctaaacggatg
aacaagcgcactctggaagcgctgattcgctcgggcgcactggatacattagggccaaac
agggcggtgctagccgccgctatggaagacgcgctgaaagccgctgcccagaaccatgcc
aatcagaatctgggtatgctggatatgttcggcgatgcttttgctgcagaagaggaagag
agcgatgcttatgctgagtatcgccacgctcgtgaatggaccgatcgtgagcggctttct
ggggaaaaagacactctggggctctacctaaccggtcaccccattgatgagtatgagcgg
gagctgaagcgttttgtttcaacacgtattagcgatttaaaaccttcccgtgagccgcaa
cgggtggctgggttggtggtggccatgcgtactatgaagtccaagcgtggtgacaccatg
gcgtttatcactctagatgaccgcactgggcggattgaagcttcactgtttggtgacgtg
tttgagcaactgcgtggccagatcgagtctgaccaggtgatcattgttgagggggaggtg
tcaaacgacgacttctctggtggcttgcgtctgcgtggcaaagacgtaactcctatggtc
actgcgcgaatacgttacgggcaggcggttgagctggcgctggatgcggggcagattaat
ggccgtttggtggagagtcttcgtgatagccttactccctaccgagatgcagcgggcctg
cccgtgcgtttgcaataccgccatcctgacgcggtggcttggctggagctagcagatgag
tggaaggtagcccccagcgatgacttactgctggcgcttcgcgatgtccaagggcaggca
ggcgtgcagctacgttaccgttaa
DBGET
integrated database retrieval system
