KEGG   Halomonas sp. 'Soap Lake #7': B2G49_15790
Entry
B2G49_15790       CDS       T09182                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
haso  Halomonas sp. 'Soap Lake #7'
Pathway
haso02020  Two-component system
Brite
KEGG Orthology (KO) [BR:haso00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    B2G49_15790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:haso03021]
    B2G49_15790
Transcription machinery [BR:haso03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     B2G49_15790
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF HTH_20 HTH_40 HTH_28 HTH_24 HTH_38 HTH_23
Other DBs
NCBI-ProteinID: AQU83914
LinkDB
Position
3451545..3452045
AA seq 166 aa
MPTNDSDRLHCLYREHHSWLKSWLVGRLGSASDAADLAHDTFIRLMVTQGATDVRQPRAY
LRTIARGLVVDRYRRQTIERAYLEALALRPEPVAISPEERLQIMETLALVDTTLHQLGDR
TRRIFLAVQLEGLSYGATAEHIGVSITTVKKHLIRAMTQCLLLMEE
NT seq 501 nt   +upstreamnt  +downstreamnt
atgcccactaatgattcggatcgcctgcactgcctttatcgggagcaccatagctggctg
aaaagctggctggtcggccgccttggctccgccagcgatgcggccgatttggcgcatgac
actttcattcgtctgatggtcacccagggcgccactgacgtacgccagcctcgtgcctac
ctgcgcaccattgcacgaggcttggtggtggatcgctaccgccgacaaactatcgaacgt
gcctacctggaagcgctagcgttacgcccagagcctgtcgctatctcaccggaagagcgc
ctccaaatcatggagacacttgcactggtcgacaccacgctccaccaacttggtgataga
acccggcgtatttttcttgccgtacagctggaagggcttagctatggtgcaacggcggaa
cacattggcgtatccatcaccactgttaaaaagcacctgattcgcgcgatgacccagtgt
ttgctgctgatggaagagtga

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