Halomonas sp. 'Soap Lake #7': B2G49_20115
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Entry
B2G49_20115 CDS
T09182
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
haso
Halomonas sp. 'Soap Lake #7'
Pathway
haso03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
haso00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
B2G49_20115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haso03021
]
B2G49_20115
03400 DNA repair and recombination proteins [BR:
haso03400
]
B2G49_20115
Enzymes [BR:
haso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
B2G49_20115
Transcription machinery [BR:
haso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
B2G49_20115
DNA repair and recombination proteins [BR:
haso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
B2G49_20115
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_XRCC3_RpoA
Acyl-CoA-dh_C
Motif
Other DBs
NCBI-ProteinID:
AQU84691
LinkDB
All DBs
Position
4417075..4418070
Genome browser
AA seq
331 aa
AA seq
DB search
MQRSVTEFLRPRDIKVEEISAHHAKIVLEPFERGFGHTLGNALRRILLSSMPGAAVVEAE
IAGVEHEYSALEGVQEDVIEILLNLKDVAIKMHSRDEAVLSLNKQGPAVVTAGDIALDHS
VEIVNPDHIIAHVNEGAELKIQLKVALGRGYEPADARGSDEETRAIGRLQLDATFSPVRR
VSYSVEAARVEQRTDLDKLIIDLETDGTLDPEEAIRRSATILQEQLAAFVDLEADKEQEV
EEEEDHVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLNE
IKDVLAARGLSLGMRLENWPPASLKDDKASA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgttcagtgacagagtttcttcgccctcgcgacatcaaggtcgaagaaatcagc
gcacatcatgccaaaatcgttctcgaaccgttcgagcgcggctttggtcacaccctgggg
aatgcactccgtcgcattctgctttcgtccatgcccggcgctgccgtggtagaggctgaa
attgccggtgtagagcacgaatatagtgcgctcgaaggggtgcaggaagatgtcatcgaa
atcctcctgaacttgaaagatgttgcgatcaagatgcacagccgcgatgaggcggtgctc
tcgctgaacaagcagggcccagccgtcgtcaccgctggcgacattgcgcttgatcatagc
gtcgaaatcgtcaacccggaccacatcattgcgcatgtcaatgaaggtgccgagctgaaa
attcagcttaaggtcgcgctgggtcgtggttacgaaccggctgacgctcgtggctctgat
gaagagacacgtgcaattggccgcctgcagctggatgctaccttcagccctgtccgccgc
gtttcctactcggttgaggccgctcgtgttgagcagcgcaccgatctcgataaattgatt
atcgacctggaaaccgacggtactctggatccggaagaggctatccgtcgcagtgcgacc
attctgcaagagcagctggccgccttcgtcgacctggaagctgacaaagagcaggaagtc
gaagaggaagaggatcatgttgatcctatcctattgcgccccgtagacgatcttgagttg
accgttcgtagcgctaactgcctaaaagccgagaatatttattacatcggtgatctgatt
cagcgcactgaagttgagctgttgaagaccccgaacctcggtaaaaagtctttgaatgaa
atcaaagatgtattggcggcgcgcggcctgtccctcggtatgcggctggaaaattggcca
cccgctagcctgaaggacgacaaagcctccgcgtaa
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