Halorhabdus sp. SVX81: SVXHr_0214
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Entry
SVXHr_0214 CDS
T09281
Symbol
dinG
Name
(GenBank) Rad3-related DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv03022
Basal transcription factors
hasv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SVXHr_0214 (dinG)
09124 Replication and repair
03420 Nucleotide excision repair
SVXHr_0214 (dinG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hasv03021
]
SVXHr_0214 (dinG)
03036 Chromosome and associated proteins [BR:
hasv03036
]
SVXHr_0214 (dinG)
03400 DNA repair and recombination proteins [BR:
hasv03400
]
SVXHr_0214 (dinG)
Enzymes [BR:
hasv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SVXHr_0214 (dinG)
Transcription machinery [BR:
hasv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SVXHr_0214 (dinG)
Chromosome and associated proteins [BR:
hasv03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SVXHr_0214 (dinG)
DNA repair and recombination proteins [BR:
hasv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SVXHr_0214 (dinG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
ATPase
SLFN-g3_helicase
AAA_34
AAA_25
nSTAND3
AAA_22
AAA_16
SecA_DEAD
HBB
Sigma54_activat
PhoH
DUF1441
Motif
Other DBs
NCBI-ProteinID:
WEL16399
LinkDB
All DBs
Position
complement(233898..236066)
Genome browser
AA seq
722 aa
AA seq
DB search
MASDPDYARFFPYEEPYDHQREAIEGIGDALEDGSDVLLEGATGTGKTLAALTPALEFAR
RTDKTVVITTNVHQQMRQFVADARQITEQEPIRAAVFRGKGSMCHIDVGYEECQALRETT
RDLVDSEAEQAELERRQRELLDASQEGDSEAAEARSAVMDELDAVAEEIETLKEEQATCD
HYYRNLTTDTDEFYAWLYDDVRTPDQVYEYAERQGLCGYELLKEGIDGVDLVICNYHHLL
DPFIREQFFRWLGRDPEDVIAVFDEAHNVEDAAREHARRTLAEPTLERALEELEDVDDPR
AGPAGNVLETILTALRETYDDALGFGERETIDEDWTDLAIDNDDRRDDLTLSILQNYTGQ
GVHEDLEEAVALGQALDQQYDEAYKDGETSVRKECPTLQAATFFDGWFEDGEQTGLYPVV
SVRREDGDGDLYGRAELYTAIPERVTRTLFDDLYASVLMSATLRPFDVTEDVLGLDDPET
MAYGPQFPEERRRTYAVDVPSLFASRRDDPELQDTVASVVEDAVRLTPGNTLAFFPSYAE
AERYHDRVDVEATKYLDEPGTRAQELRETFTEGENGVLFTSLWGTLGEGVSYDGDDARTV
LVVGVPYPYLDDRMDAVQDVYDGAFDAEEAGWRYAVEIPTIRKTRQAMGRVVRSPDDFGA
RVLVDRRYTEKAEIESPEYAVRGTFPPVERGEMIDVDPDKLKFGLLNFYADMDAYDGEPP
EP
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
gtggcgtccgatcccgactacgcacggttctttccctacgaggagccatacgaccaccag
cgtgaggccatcgagggcatcggggacgcactcgaagatggatcggacgtcttgctggag
ggggcgacagggacgggcaagaccctcgcggccctgacgccggccctggagttcgcccgc
cggacggacaagacagtcgtgatcacgaccaacgtccaccagcagatgcgccagttcgtg
gcggacgcgcgccagatcacggaacaagagccgatccgggcggccgtcttccgcgggaaa
ggctcgatgtgtcacatcgacgtgggctacgaggagtgtcaggcgttgcgggagacgact
cgcgatctcgtcgacagcgaagccgaacaggccgagctggagcgtcgccagcgcgaactt
ctggacgcgagtcaagaaggggacagcgaggctgccgaagcacgctcagcagtcatggac
gaactcgacgcggtcgccgaggagatcgagacgctcaaagaggagcaggcgacctgcgac
cactactatcggaatctcacgaccgataccgacgagttctacgcgtggctgtacgacgac
gttcgcacgcccgatcaggtctatgagtacgccgaacgccaggggctctgtgggtacgag
ctcctgaaagaggggatcgacggcgtcgatctggtcatctgtaactaccatcacctgctg
gatccgttcatccgcgagcagttcttccggtggctcggccgcgatccagaggacgtgatc
gccgtcttcgacgaggcccacaacgtcgaggacgcggctcgcgagcacgcccgccggacg
ctggccgaaccgacgctcgaacgggcactcgaagaactcgaagatgtcgatgatccccgt
gccggcccggcgggaaacgtcctcgagacgatcctgaccgccctccgggagacctacgac
gacgcgctcgggttcggcgagcgcgagacgatcgacgaagactggaccgacctcgcgatc
gacaacgacgaccgccgggacgacctcacgctgtcgatcctgcaaaattacaccggacaa
ggcgtccacgaggacttagaggaagccgtcgcgctcgggcaggccctcgaccagcagtac
gacgaggcctacaaggacggcgaaacgagtgtccgcaaggagtgtcccacgctccaggcg
gccacctttttcgacgggtggttcgaagacggcgagcagaccggcctgtatccagtcgtc
agtgtccggcgggaggacggggacggcgatctttacggccgggcggaactctacacggcc
atccccgagcgggtgacgcggacactgttcgacgatctctacgcctcggtgctgatgagc
gcaaccctacgccccttcgacgtgaccgaggacgtcctggggctggacgacccggagacg
atggcctacggcccgcagtttcccgaggagcgccgccggacctacgccgtcgatgtcccg
tcgctgttcgccagccggcgggacgaccccgaactccaggacaccgtcgcgagtgtcgtc
gaggacgccgtccgattgacgcccggcaacacgctcgcgtttttccccagctatgcggag
gccgagcgctaccacgatcgggtcgacgtcgaggcgacgaaatacctcgacgaaccgggc
acccgcgcccaagaactgcgcgagaccttcaccgagggagagaacggcgtcctcttcacc
tcgctgtggggcaccctcggcgagggcgtgagttacgacggtgacgacgcccggacggtc
cttgtcgtcggcgtcccctatccctacctcgacgaccggatggatgccgtccaggacgtc
tacgatggggccttcgacgccgaggaggccgggtggcgctacgccgtcgagatcccgacg
atccgcaagacgcgccaggcaatgggacgggtcgtccgctcgcccgatgacttcggtgcg
cgggtactggtcgatcggcgctacaccgaaaaagccgagatcgagtccccggagtacgcc
gtccggggcaccttcccgccggtcgagcgcggcgagatgatcgacgtcgatccggacaaa
ctcaagttcggattgctcaacttctacgccgacatggacgcctacgacggcgaaccgccg
gaaccctga
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