Halorhabdus sp. SVX81: SVXHr_0395
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Entry
SVXHr_0395 CDS
T09281
Symbol
sua7
Name
(GenBank) Transcription initiation factor TFIIB, Brf1 subunit/Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SVXHr_0395 (sua7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hasv03021
]
SVXHr_0395 (sua7)
Transcription machinery [BR:
hasv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
SVXHr_0395 (sua7)
Prokaryotic type
Archaeal type
TFB
SVXHr_0395 (sua7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Trm112p
A2L_zn_ribbon
Zn_ribbon_LysW
Zn_Ribbon_YjdM
Zn_ribbon_IS1595
Lar_restr_allev
TerY_C
Zn_ribbon_PaaD
Sigma70_r4
Cyclin_C
Motif
Other DBs
NCBI-ProteinID:
WEL16576
LinkDB
All DBs
Position
complement(410164..411159)
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AA seq
331 aa
AA seq
DB search
MGLHCYYISAMTRSTRQRERERESETETDEQEGVEECPECGSDSLVKDADRGELICEDCG
LVVEEGNIDPGPEWRAFNHQERQEKSRVGAPTTQTMHDKGLTTTIDWKDKDAYGRSISSK
KRSQMHRLRKWQERIRTKDAGERNLQFALSEIDRMASALGVPRSVREVASVIYRRALDDD
LIRGRSIEGVATSALYAACRKEGIPRSLEEISEVSRVERKEIGRTYRYISQELGLEMEPV
DPKKYVPRFCSELELSEEVQSKANEIIETTAEKGLLSGKSPTGYAAAAIYAASLLCNEKK
TQREVADVAQVTEVTIRNRYQEQIEAMGIHS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
gtgggattacactgctactatataagtgcgatgacacggtctacccgccagcgggagcgc
gagcgcgagtccgagaccgaaaccgacgaacaagagggggtggaggagtgtccggagtgc
ggatccgatagcctggtgaaggacgcggaccggggcgagttgatctgtgaggactgtgga
ctggtcgtcgaggaggggaacatcgaccccggccccgagtggcgggcgttcaaccaccag
gaacggcaggagaagtcccgcgtgggcgcgcccacgacccagacgatgcacgacaagggg
ctgaccacgaccatcgactggaaggacaaggacgcctacgggcgttcgatctcctcgaag
aagcgcagccagatgcaccgcctgcgaaagtggcaggaacgcatccggacgaaggacgcg
ggcgagcgcaacctccagttcgccctgagcgagatcgaccggatggcgtcggcgcttggc
gtcccccgctccgtacgggaggtcgcctcggtcatctatcgacgggcgctggacgacgac
ctcatccgtggccgatcgatcgaaggggtcgcgacctcggcgctgtacgctgcctgtcgg
aaggaaggcatcccccggagcttagaggagatcagcgaggtctcccgcgtcgaacgcaag
gagatcggccgcacctatcggtacatctcccaggaactcggcctcgagatggagcccgtc
gaccccaagaagtacgtcccccggttctgttcggaactcgaactgagcgaggaggtccag
agcaaggccaacgagatcatcgaaaccaccgccgagaaggggctgctgtcgggcaagtcc
ccgaccggctatgcggccgccgcgatctacgctgcctcgctgctttgcaacgagaagaag
actcaacgggaggtcgccgacgtcgcccaggtgacggaagtcacgatccggaaccgctat
caggagcagatcgaagcgatgggcatccacagctga
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