Halorhabdus sp. SVX81: SVXHr_0731
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Entry
SVXHr_0731 CDS
T09281
Symbol
nusG
Name
(GenBank) Transcription antiterminator NusG
KO
K15172
transcription elongation factor SPT5
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
SVXHr_0731 (nusG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hasv03021
]
SVXHr_0731 (nusG)
03019 Messenger RNA biogenesis [BR:
hasv03019
]
SVXHr_0731 (nusG)
Transcription machinery [BR:
hasv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
SVXHr_0731 (nusG)
RNA polymerase I system
SVXHr_0731 (nusG)
Messenger RNA biogenesis [BR:
hasv03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
SVXHr_0731 (nusG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW4_SPT5
Ribosomal_uL24m-like
DUF6093
SH3_KIN17_C
DbpA
KOW2_Spt5
Motif
Other DBs
NCBI-ProteinID:
WEL16910
LinkDB
All DBs
Position
763814..764251
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AA seq
145 aa
AA seq
DB search
MGIFAVKTTASQERTVADMIMNREEDSVHAALAPDSLTSYVMVEAEDASVFERILDEIPH
ANGVVQGKSSIKEVEHFLSPTPDVEGIAEGDIVELIAGPFKGEKAQVQRIDEGKDQVTVE
LYEATVPIPVTVRGDQIRVLDSEER
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atggggatcttcgccgtcaagaccacggccagtcaggagcgcaccgtcgccgacatgatc
atgaaccgtgaggaggactcggtccacgccgcactcgcgccggacagcctgacctcctac
gtcatggtcgaggcagaggatgcttcggtattcgaacggattctcgacgagataccccac
gccaacggcgtcgtccagggcaagtcctcgatcaaggaggtcgagcacttcctctcgccg
acgccggatgtcgaggggatcgccgagggcgacatcgtcgaactcatcgccggcccgttc
aagggcgagaaggcccaggtccagcgaatcgacgagggtaaagatcaggtcacggtcgaa
ctctacgaggcgacggttccgattcccgtgacggttcgtggggatcagatccgcgtactc
gattcagaagagcggtaa
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