Halorhabdus sp. SVX81: SVXHr_0819
Help
Entry
SVXHr_0819 CDS
T09281
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit A'
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SVXHr_0819 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hasv03021
]
SVXHr_0819 (rpoA)
Enzymes [BR:
hasv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SVXHr_0819 (rpoA)
Transcription machinery [BR:
hasv03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
SVXHr_0819 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_5
DnaJ-X
Motif
Other DBs
NCBI-ProteinID:
WEL16996
LinkDB
All DBs
Position
847545..850535
Genome browser
AA seq
996 aa
AA seq
DB search
MNPEEYRDMSATKVITADTYDDDGFPIDMGLMDPRLGVIDPGLECKTCGKHSGSCNGHFG
HIELAAPVIHVGFSKLIRRLLRGTCRECSRLTAVDGSKYTDGDGNVDLEAASAAAEDKKR
EFKEELRRARELSNDPSDVLKSAIRQARSASRCPHCGEKQFDVKHEKPTTYYEIIEVPHA
ELAERLSMAMDPPEGEPVTPDELEEATDGAFDAGRIRELLSDTYRPDRNDIPALQEIGSA
LHRFNDLEEHLGDELDIESPSSYLLEEDMDKLMPSDIRDWFEEIPDDDLEAIGVNPETSR
PEWMILTVLPVPPVTARPSITLDNGQRSEDDLTHKLVDIIRINQRFMENREAGAPQLIIE
DLWELLQYHVTTFMDNEISGTPPARHRSGRPLKTLSQRLKGKEGRFRGSLSGKRVNFSAR
TVISPDPTLSLNEVGVPDRVASEMTQTMNVNERNLAEARQYVSNGPEAHPGANYVRRPDG
RRLKVTEKNCEELAEKVEPGWEVARHLLDGDIVIFNRQPSLHRMSIMAHEVVVMPYKTFR
LNTVVCPPYNADFDGDEMNMHALQNEEARAEARVLMRVQEQMLSPRFGENIIGAIQDHIT
SVYLLTHQNPHFNETQALDLLRATNVDELPKPDGEEDGRAYWTGRSIFSELLPDDLDLEF
TSEAGDDVVIEDGQLLEGTIDDSAVGAFGGEIVDTIAKVYDKTRARIFINEVSTLAVRTI
MHFGFSIGIDDESIPPAAQEQVEEAIGSAYDRVQELIETYEQGDLESLPGRTVDETLEMK
IMQTLGQARDSAGDIAEDHFAEDNPAVVMADSGARGSMLNLTQMAGCVGQQAVRGERINR
GYEDRTLSHFEENDLSAEAHGFVEHSYREGLGPKEFFFHAMGGREGLVDTAVRTSKSGYL
QRRLINALSELETQYDGTVRDTSDTVVQFEFGEDGTSPVDVSSNEDFDIDVEAITERIVE
AEFDDESEKATFLEREASPTNLSEHADEWWHAEAGD
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccgaggagtaccgcgatatgagtgccacgaaggtcatcacggccgacacctac
gacgacgacggcttccccatcgacatggggctgatggacccgcgactcggcgtgatcgac
cccggcctggagtgtaagacctgtggcaaacactcgggatcgtgtaacggccacttcggc
catatcgaactcgccgctcccgtcatccacgtcggcttctcgaagctcattcgccgattg
ctgcgcggaacctgtcgggaatgctcccggctgacggccgtcgacggctcgaagtacact
gatggcgacggcaacgtcgatctcgaagcagcttcggccgctgccgaggacaagaaacgc
gaattcaaggaggagctccggcgggcgcgagaactctcgaacgacccttcggacgtcctc
aagtccgcgatccggcaggcccgctcggccagccggtgtccccactgtggggaaaagcag
ttcgacgtcaaacacgagaaaccgacgacgtactacgagatcatcgaggtcccccacgcc
gaactcgccgaacgcctcagcatggcgatggacccgccggaaggcgaacccgtcacgccg
gacgaactcgaagaggcgaccgacggcgcgttcgacgccggtcggatccgggaactcctc
tcggacacctaccggccggaccgcaacgacatccccgcgctccaggagatcggcagcgcg
ctccaccggttcaacgacctcgaggagcatctcggcgacgaactcgacatcgagagtccg
tcgtcgtacctcttagaggaggacatggacaagctgatgccgagtgacatccgggactgg
ttcgaggagatcccggacgacgacctcgaggcgatcggggtcaaccccgagacctcgcgg
ccggagtggatgatcctcaccgttttgccggtgccgccggtgacggcccgtccctcgatc
acgctggacaacggccagcgctcagaggacgacctcacccacaagctggtggacatcatc
cggatcaaccagcggttcatggagaaccgcgaggccggcgcgccccagctcatcatcgag
gacctctgggaactgctgcagtaccacgtcaccaccttcatggacaacgagatcagcggg
acgccgccggcccgacaccgttcgggccgaccgctgaaaaccctcagccagcgcctgaag
ggcaaggaggggcgcttccgtgggagcctctccgggaaacgggtgaacttctcggcccgg
actgtcatctcgccggacccgacccttagcctgaacgaggtcggcgtgccagaccgggtc
gccagcgagatgacccagacgatgaacgtcaacgagcgcaacctcgcggaggcgcgccag
tacgtctccaacggaccggaggcccatccgggcgcgaactacgtccgacggcctgacggc
cgacgattgaaggtgacggagaagaactgcgaggagctcgccgagaaggtcgagccgggc
tgggaagtggctcgccacctgctcgacggcgacatcgtgatcttcaaccgccagccgagt
ctccaccggatgtccatcatggcccacgaggtcgtggtgatgccctacaagacgttccgg
ctgaacaccgtcgtctgtccgccgtacaacgccgacttcgacggcgacgagatgaacatg
cacgccctccagaacgaggaggcccgtgccgaggcccgcgtcctcatgcgcgtccaggaa
cagatgctctcgccgcgcttcggcgagaacatcatcggggcgatccaggaccacatcacg
tcggtgtacctgctgacccaccagaacccccacttcaacgagacccaggccctggacctc
ctgcgggcgacgaacgtcgacgaactgccgaaacctgatggagaggaagacggccgggcc
tactggacgggtcggtcgatcttctcggaactgttgccggacgacctcgacctcgaattt
acgagcgaggccggcgacgacgtcgtcatcgaggacggccagttgctcgaagggacgatc
gacgacagcgcagtcggggccttcggcggcgagatcgtcgacacgatcgcgaaggtctac
gacaagacgcgggcgcggatcttcatcaacgaggtctcgacgctcgcggtccggacgatc
atgcacttcgggttctcgatcgggatcgacgacgagtcgatcccgccggcagcccaggaa
caggtcgaggaggcaatcggcagcgcctacgaccgcgtccaggaactcatcgagacctac
gaacagggcgatctcgaatcgctcccgggccggacggtcgacgagactctggagatgaag
atcatgcagacgctcggccaggcccgtgacagcgcgggtgacatcgccgaggaccacttc
gccgaggacaacccggcagtggtgatggccgactccggggcgcgtgggtcgatgctgaac
ctgacccagatggccgggtgtgtcggccagcaggcagtccgcggcgagcggatcaaccgt
ggctacgaggaccgcaccctctcgcacttcgaagagaacgacctctcggcagaagcacac
ggcttcgtcgagcactcctatcgtgagggcctcggcccgaaggagttcttcttccacgcg
atgggtggccgcgagggcctggtcgacacggcagtccggacctccaagtccgggtacctc
cagcgtcggctgatcaacgccctctccgaactggaaactcagtacgacggcaccgtccgg
gacacaagcgacaccgtcgtccagttcgagttcggcgaggacggcacctcgcccgtggat
gtttcctccaacgaggacttcgacatcgacgtcgaggcgatcaccgagcggatcgtcgag
gccgagttcgacgatgaaagcgagaaggcgacgttcctcgagcgcgaggcgagtccgacc
aacctctcggaacacgcggacgagtggtggcacgcggaggccggagactga
DBGET
integrated database retrieval system
