Halorhabdus sp. SVX81: SVXHr_1040
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Entry
SVXHr_1040 CDS
T09281
Symbol
sua7-3
Name
(GenBank) Transcription initiation factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SVXHr_1040 (sua7-3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hasv03021
]
SVXHr_1040 (sua7-3)
Transcription machinery [BR:
hasv03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
SVXHr_1040 (sua7-3)
Prokaryotic type
Archaeal type
TFB
SVXHr_1040 (sua7-3)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_RRN7
Trm112p
A2L_zn_ribbon
BRF2-like_C_cyclin_rpt
HTH_24
Zn_ribbon_tTFIIB
DUF1272
DZR
DZR_2
Auto_anti-p27
DUF8054_C
Zn_ribbon_Top1
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
WEL17214
LinkDB
All DBs
Position
complement(1047650..1048642)
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AA seq
330 aa
AA seq
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MSETSTRSRPTERTGERKTDQQVEHEETKTEVCPECGGDLVTDSERGETVCGECGLVVEE
DEIDPGPEWRAFDSAEKDKKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGNSLSSRQREKM
QRLRTWNERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDENLLPGR
SIEGVSTASLYAAARQAGNPRSLDEIERVSRIDRMELTRTYRYVVRELNLEVKPADPESY
IPRFVSDLNLSEEVSRQARELVDSARESGILSGKSPVGIAAAAIYAAALLSNERVTQGDI
SEVADISEVTIRNRYKELLEAKSAGSQQVA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaacatcaacccgatcacgaccgacagaacgaactggcgaacgcaagactgac
caacaggtcgagcacgaggaaacaaagacggaggtctgtccggagtgtggtggcgacctg
gtaacggactccgaacgcggcgagaccgtctgtggggagtgtggcctcgtcgtcgaggaa
gacgagatcgaccccggtccggagtggcgggcgttcgattccgccgagaaggacaagaag
tcccgcgtcggtgccccgacgacgaacatgatgcacgacaagggactctcgaccaacatc
ggctggcaggacaaggacgcctatggcaattcgctgtccagccgccagcgcgagaaaatg
cagcgcctgcgcacctggaacgagcgcttccggacgcgtgactccaaagagcgcaatctc
aagcaggccctcggcgagatcgaccgcatggcctcggcgcttggcctccccgagaacgtt
cgcgagaccgccagcgtcatctatcgccgcgcgctggacgagaacctcctgccaggccgc
tccatcgagggtgtctcgacggcgtcgttgtacgccgccgcccgacaggccggcaacccc
cgcagtctcgacgagatcgaacgcgtctcccggatcgaccggatggagctcacacggacg
tatcgctacgtcgtccgggagttgaatctggaggtcaagcccgccgaccccgaaagttac
attccgcggttcgtctccgacctcaacctgagcgaggaagtttcccggcaggctcgcgaa
ctcgtcgattccgcgcgtgaatccggtattctcagcgggaagagtccagtcggaatcgcc
gcggccgcgatctatgcggccgcgctgttgagcaacgagcgagtgacccagggagacatt
tccgaggtcgcggacatctccgaagtgacgatccggaaccgctacaaggagcttctcgag
gctaaatcggccggtagccagcaggtcgcgtaa
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