Halorhabdus sp. SVX81: SVXHr_1114
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Entry
SVXHr_1114 CDS
T09281
Symbol
mutS-2
Name
(GenBank) Mismatch repair ATPase (MutS family)
KO
K03555
DNA mismatch repair protein MutS
Organism
hasv
Halorhabdus sp. SVX81
Pathway
hasv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SVXHr_1114 (mutS-2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hasv03400
]
SVXHr_1114 (mutS-2)
DNA repair and recombination proteins [BR:
hasv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
SVXHr_1114 (mutS-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
WEL17288
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Position
1127561..1130158
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AA seq
865 aa
AA seq
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MDAALGPPAKMTDRREDLTPMLRQYVELTERYDDALVLFQSGDFYKAFCEAAEVLARICE
VTLTEREDSTGTYAMTGVPVENAESYVEKLLDAGYRVAIADQVEDPDEVSGVVERAVTRI
ITPGTLTEDELLGGAENNYVAALAADDGRFGLAVLDVSTGDFYATSTDDRETVRDELGRF
SPAEGILGPDVPNLFDGACTVSPVEGTYFATDRAAERVSEYFGTPDRLLATGAEVRACGA
LLAYAEYARGGEDGRLDYLNHLTRYDPRAYMVLDAVALESLEIFERRSVTGGADLTLVDV
IDETASALGRRRLTEWLRRPLIDRDRIEARQAAVGALVSELQTRERLHELLSDVYDLERL
ISRVSRSRADARDLRSLKDTLDVIPEIKAALDGIDAPLLTDLRDRLDEMDDVRGLIDDAI
AADPPTEITEGGIISEGYDDRLDELRATEREGKEWITDLEESERERTGIDPLKVGHNAVH
GYYIEVTDANLDRVPEDYQRRQTLKNAERYYTPELKEREDEILRAEGQADDLEYELFVEV
RDDVAAESERVQAVADAVANLDVLVGFATVAAERDYCRPSVGGDGIDIEGGRHPVVERTE
DGFVPNDTHLDDDAFLAVITGPNMSGKSTYMRQVALIAILAQAGSFVPAESADLRIVDRV
FTRVGASDDIAGGRSTFMVEMSELATILAQATDESLVLLDEVGRGTSTTDGLAIAQAVTE
FIHDEVGATTLFATHHHELTDVAAALDSARNFHFRTEQAGEEVSFPYDVALGPAAASYGV
EVAGVAGVPDPVVDRSRELLGDSDADGREPGQEPDRTATERESETLGEPDRDDVVAELRS
LSVAEMTPIQALNALADLQRQANRE
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggccctgggaccgccggcgaagatgaccgaccggcgcgaggatctcacgccg
atgttgcgccagtacgtcgagttgaccgagcgctacgacgatgccctggtgctgtttcag
tcgggtgacttctacaaggcattctgcgaggccgccgaggtactggcccggatctgtgag
gtgacgctgaccgaacgtgaagactcgaccgggacgtacgcgatgaccggtgtaccggtc
gaaaacgccgaatcctacgtcgagaaacttctggacgcgggctatcgcgtcgcgatcgcc
gatcaggtcgaagaccctgacgaggtcagcggcgtcgtcgagcgtgcggtcacgcggatt
atcacgccagggacgctcaccgaggacgaactgctcggtggtgccgagaacaactacgtc
gccgcgctggccgctgacgatggtcgatttggcctggctgtcctcgacgtttcgacgggg
gacttctacgcgaccagcaccgacgaccgggagacggtcagggacgaactcggtcgattc
tcgcccgctgagggaatcctcggccccgacgtcccgaacctcttcgatggggcgtgtacc
gtcagccccgtggaggggacgtacttcgccactgaccgggcagccgagcgcgtcagcgag
tacttcgggacgcctgatcgactcctcgcgaccggtgccgaggtccgggcctgtggcgcg
ttgttggcctacgccgagtacgcccgcggcggggaggacggtcggctcgactatctcaat
cacctcacgcgatacgatccgcgggcgtacatggtactcgacgcggtcgcgctcgaaagc
ctagagatcttcgaacgccggagtgtcaccggcggcgcggacctgacgctcgtggacgtg
atcgacgagacggcgtctgccctcggccgtcgtcggctgaccgaatggcttcgccgtccg
ctcatcgaccgcgaccggatcgaggcgagacaagcggccgtgggcgcgctcgtctcggag
ctccaaacccgcgaacggctccacgagctactatccgacgtctacgacctcgaacgactc
atctcacgcgtttcccgctcgcgagccgacgcccgtgacctccgctcgttgaaagacaca
ctcgacgtgatcccggagatcaaagcggcgttggacggcatcgatgccccgctgttgacc
gaccttcgagaccgtctcgacgagatggacgacgtccgcgggttgatcgacgacgcgatc
gcggcggacccaccgaccgaaatcaccgagggtgggatcatcagtgagggctacgacgac
cgactcgacgagttgcgcgcgaccgaacgggagggcaaggagtggatcaccgacttggag
gaaagcgaacgcgagcggaccggcatcgacccgttgaaggtcggccacaacgccgtccac
ggctactacatcgaagtgaccgacgcgaacctcgatcgggtccccgaggattaccagcgc
cgacagacgctgaagaacgccgagcgctactacacgcccgaactcaaggagcgggaagac
gagatccttcgggcggaagggcaggccgacgatctggagtacgagttgttcgtggaagtg
cgagacgatgtcgccgccgagtccgagcgcgtccaggcagtcgccgacgctgtggcaaat
ctcgacgtgcttgttggctttgccaccgtcgcggccgagcgggattactgccgcccctcg
gtcggtggggacggaatcgacatcgagggaggtcgccacccggtcgtcgagcgcaccgag
gacgggttcgttccgaacgacacccatctcgacgacgacgcctttctcgcggtgatcacc
gggccgaacatgagcgggaagtcgacctacatgcgccaggtcgcgctgatcgcgatcctc
gcccaggctgggagtttcgtgcccgccgaatcggccgacctgcggatcgtcgaccgcgtg
ttcacccgcgtcggcgcgagtgacgacatcgccggcgggcgctcgacgttcatggtcgag
atgagcgaactcgcgacgattctggcgcaagcgaccgacgaatcactggtgctgctggac
gaagtgggccgtggcaccagtacgaccgacggcctggcgatcgcccaggcagtgacggag
ttcatccacgacgaggtcggcgcgacgacgctgttcgcgactcaccaccacgagttgact
gacgtggcagcagcactggatagcgcacggaatttccacttccggaccgaacaggcgggc
gaagaggtctcctttccctacgatgtcgctctcgggccggcagcagcctcctacggtgtc
gaggtggccggggtggccggcgtgccggacccggtcgtcgaccgctcgcgagaactgctc
ggtgacagtgacgccgacggccgggaaccgggtcaagagcccgatcgaaccgcgacggaa
cgtgaaagtgaaacgctcggggaacccgatcgagacgatgtcgtcgccgaactccgatcg
ctttccgtcgctgagatgacgcccattcaggcgctgaacgcgttggccgacttacagcgt
caggccaatcgggagtag
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