Halorhabdus sp. SVX81: SVXHr_1156
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Entry
SVXHr_1156 CDS
T09281
Name
(GenBank) PKD domain-containing protein
Organism
hasv
Halorhabdus sp. SVX81
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
BiPBP_C
Motif
Other DBs
NCBI-ProteinID:
WEL17330
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All DBs
Position
complement(1169792..1171894)
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AA seq
700 aa
AA seq
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MTGRSYFTPAPEIVSMRGGRTVLVVALLLIASWGLVAVTTADGEAVNPGDENDTNVSSDR
SIWNRTYLNYPADDGGNRSFYGVEETAAGYLFVGSGRDSLVGTGGEVKASVVETRTDGSL
VWERSVLPAGTHHRVYHDGVKLGPQTYVFGGTINAPSRFEPGTYWLADSDRNVHTWQIRS
GDGAFFDLLEVEESVVAIGSRAVIRIGANGTIHWRHSMPDIGSVYRAGARAADGYVLAGW
TVTRQAGGFGDAARIRLVNHSGEREWTQTFGLAAGFNATASRLYAATPADDGFVFGGTRS
DGEDRRGWVIATNETGSVDWTHSLPADTRVLGVAAGPDGVVAVGQSGNQSGRVWRFDHDG
TVISTAQYGYVLRDVIRTEAGTYVTAGSRPTTNRDPFAVALDYTPPNATVQMSTGGVRTT
GTPVAVTANGSTDNTAIETYRWDFDSDGNVDRTTSTPTVTHVYTETGTVTPTVTVVDAAG
NADRANASTITLADRTAPTVGLADPSNGLAATTGPTLLDASASTDNGRIERYLWDFDGDG
TVDRTTDEPTTRYRFDRRNHTYSVGIGAVDAAGNRNVTTVAIKTCSNDRPHVRTDVAAWR
TQDRARARLNATVENDVGTATVTWRLPNGSVHTGRSVAFAFEQSPSIVNVTVTDEYGAEQ
TRHVVVWTPAARAEGTSSGQFRRLLAAIGSLVDRALALLR
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcagaagctactttactcccgctcccgaaatcgtgtcaatgagagggggtcgg
acggtactggtggtcgctctgttactgatcgcctcgtggggactcgtcgctgtgacgaca
gcggacggcgaggctgtaaacccgggtgatgaaaacgacacgaacgtgtcgagcgaccgg
agcatctggaaccggacctacctgaactatccggcggacgacggtggaaatcgatcattc
tatggcgtcgaggagacggctgcggggtatctgtttgtcggatccggccgggactcgctg
gtggggacgggcggtgaggtgaaagcctccgtcgtggaaacccggaccgacggatcgctg
gtgtgggaacggtcggtcttgccggcgggaacgcaccaccgcgtctatcacgacggggtc
aagctcggcccgcaaacctacgtcttcggcgggacgatcaacgcgccgtcccggttcgaa
ccgggaacctactggctcgcggattccgatcggaacgtccatacctggcagatcaggtcg
ggcgacggtgcgttcttcgacctgcttgaggttgaggagagcgtggtggcaatcgggagc
cgcgccgtcatccggatcggagccaacggtaccattcactggcgacactcgatgcccgac
atcgggagcgtctatcgggccggtgcgcgggcagctgatggatacgtcctggcgggctgg
acggttactcgtcaggcgggtgggttcggcgacgccgcgcgcatccggctggtcaatcac
tccggcgaacgcgagtggacacaaacgttcggtctcgctgctggattcaatgccacagcg
agtcggctgtacgcggcgacgccggcggatgacgggttcgtgttcggcggcacgcgatcc
gacggcgaggaccgtcggggctgggtgatcgcgacgaacgaaacgggttcagtggactgg
acgcattccctcccggcggacactcgggtgctcggcgtcgccgccggccccgatggggtc
gtcgcagtcggacagtccggcaatcaatcgggccgagtctggcgcttcgatcacgacgga
acggtgatatcgaccgcgcagtacggctatgtcttgcgggacgtcatccggacggaagca
gggacgtacgtcacggctgggtcgcggccgacgaccaatcgggacccgttcgccgtcgcg
ctcgattacacgccgccgaacgcgaccgtacagatgtcgaccgggggagtccgaacgacc
gggactccagttgcagtcaccgccaacgggagtacggacaacacggctattgagacctac
cgctgggatttcgacagcgacggaaacgttgaccggacgacctcgacgccgactgtcacg
cacgtctacaccgagacgggaacggtcacgccgacagtcaccgtcgtcgacgcagccggg
aacgccgaccgggcgaacgcgagcaccatcacactcgccgatcggacggcccccaccgtg
gggcttgccgatccgtcaaacgggctggctgcgacgaccggtccaaccctgctcgacgcg
agtgcgagcactgacaacggacggatcgaacgatatctgtgggatttcgacggcgacggg
acggtcgaccggacgaccgacgaaccgacaacacgctaccggttcgatcgacgtaaccac
acctattcagtcggcatcggagctgtcgacgcagccggcaaccggaacgtgactaccgtc
gcaatcaagacctgttcgaacgacaggccccacgtgaggaccgacgttgcggcctggcgg
acccaggaccgggcccgggcgcgactcaatgcgaccgtcgagaacgacgtcgggaccgcg
actgtgacctggcggcttcccaacggcagcgttcataccggccgttcggtcgcgttcgcg
ttcgaacagtcaccgagtatcgtcaacgtaacggtgaccgacgagtacggtgccgaacag
acacggcacgttgtcgtctggacgccggccgccagggccgaaggcacgtcatcgggacag
ttcagacgcctgctcgcagcgatcggctcactcgtggatcgcgccctcgcgttgctcagg
tga
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