KEGG   Halorhabdus sp. SVX81: SVXHr_1196
Entry
SVXHr_1196        CDS       T09281                                 
Symbol
hsdR
Name
(GenBank) Type I restriction-modification system, R subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
hasv  Halorhabdus sp. SVX81
Brite
KEGG Orthology (KO) [BR:hasv00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hasv02048]
    SVXHr_1196 (hsdR)
Enzymes [BR:hasv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SVXHr_1196 (hsdR)
Prokaryotic defense system [BR:hasv02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SVXHr_1196 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1RH-like_C T1R_D3-like ResIII DEAD GatB_Yqey SLFN-g3_helicase
Other DBs
NCBI-ProteinID: WEL17368
LinkDB
Position
complement(1211265..1214234)
AA seq 989 aa
MPDEYAESERPALEALQRLGWDVLDQQQANWADPRETQSSAVLEPRLRKAVKRLNPWLNE
NNLNKAVREIQQVAGTSTMDENEQIHEKLVRHISVEQDRGNGKQHYTVQYIDYENPENND
FFALNQFRVAGPVEVIKPDIVLFVNGIPLGVVECKSPQIPEPKSEALDQLSRYQNERKGE
AEGAEELFRYNQFSVATWMEGAVMGTYRTPKDQYKPWRDAYPLEDDELIDRFDLDGYLPD
QYRMLYALFEPERLLDQLRHYTVFEESQSGTIKMVARYQQYRAVRKALERIDKRGQREAN
GGVVWHTQGSGKSLTMLFLALKLRRLEDDPTLVLVTDRRALNDQIHATFERCGFPNPKKA
RSIEDLRERLQYDAGETITTLIHKFQTTDDEDDDDEFPVLSRNENIYVMADEAHRTQDKN
LANNMRTALPNAFYVGFTGTPIEKDEVNTRRTFGNYIDTYTIDQSLDDGATVEILYQGRL
ADIHLEGETLDRLFDRIFSDKTEEEKAEIQKRYARTQDLAEAQPRIDRVALDIVEHFEEE
VPQPFKGMVVTTSKEAAIRYKETLDSLNGPESRVVISEGHNDPEQIKQWTPSGSEKSQYK
ESFVDPNSEVELLIVCDMLLTGFDAPVAQVMYLDKPLREHSLLQAIARVNRPFEEKTHGL
IIDYYGVSDELKEALAMFSSRDVERAMVPVKDKQEDLEAAHNRAVSFFDDLDAVEKCVQS
LEPDDRRIEFKNAFKRFSKLMDIVLPDPMANPYRDDLEQLSTIYGKAKERYRDETMNLEG
AGAKVRELIQDHITSQGIEILNDEPVSIMDEVEFDARLEDLESDEARASEMQNAIKHEIN
VRFDEDPVQYGSLKERLEELIEKYREGRLSEQGTIEELRTLMEEIRSRDKAARRKGLRGE
TDLSFYHAVEDVLDEHDFGEEDFVELTAELVGTVEKFVTKVEWKERTHLQNTMRKEVTGQ
LYRSEIDLSAEERRELTNRVIELARAHYQ
NT seq 2970 nt   +upstreamnt  +downstreamnt
atgcccgacgagtacgccgaatccgaacgcccggctctcgaagccctccagcggcttggc
tgggatgtcctcgaccagcaacaggccaactgggccgacccacgcgagacccaatcctcg
gccgtcctcgaaccgcgacttcgcaaagccgtgaaacgtctgaacccctggctcaacgag
aacaacctgaacaaggccgttcgggagatccagcaggtcgccgggacgagcacgatggac
gagaacgagcagattcacgagaagctcgtccgccatatctccgtcgagcaggaccgcggc
aatggcaagcaacactacacggtccagtacatcgactacgagaaccccgaaaacaacgac
ttcttcgcactcaatcagttccgcgtcgcgggacctgtcgaggtcatcaaacccgacatc
gtgttgttcgtcaacggcatcccgctcggcgtcgtcgagtgcaagagcccacagatcccc
gaaccgaagtccgaagcgctcgaccaactcagccgctatcagaacgaacgcaagggtgag
gccgagggcgcggaagaactcttccggtacaaccagttctccgtcgccacctggatggaa
ggcgcggtgatgggcacttaccggacaccgaaggaccagtacaagccctggcgcgacgcc
tatcccttggaggacgacgaactcatcgaccggttcgatctcgatgggtacctgcctgac
cagtaccggatgctctacgcgctgtttgaacccgagcgcttactcgaccaactccgacat
tacacggtgttcgaagagagtcagagcgggacgatcaagatggtcgctcgctaccagcag
taccgggcggtccggaaggctctcgaacggatcgacaagcgcggccagcgcgaggccaac
ggcggcgtcgtctggcatacccaggggtcgggcaagtcgctcacgatgctctttctcgcg
ctgaagctccgccgcctcgaagacgacccgacgctcgtgctcgtcactgaccgacgggca
ctcaacgaccagatccacgcgacgttcgaacgctgtggcttcccgaacccgaagaaggcc
cggagcatcgaggatcttcgcgagcgactccagtacgacgccggcgagacgatcaccaca
ctcatccacaagttccagacgaccgacgacgaggacgatgacgacgagttcccggtgctt
tcccggaacgagaacatctacgtgatggccgacgaggcccaccgaacgcaggataagaat
ctcgcgaacaacatgcgaacggcgctgccgaacgccttctacgtcggcttcaccgggacg
cccatcgagaaggacgaggtcaacacccgccgaacgtttggcaactacatcgatacgtac
accatcgaccagtcactggatgacggcgcgacggtcgagatcctgtaccagggtcggctc
gccgacatccacctcgaaggtgaaacactggatcgactgttcgatcgcatcttctcggac
aagactgaggaagaaaaggccgagattcagaagcgctacgcccgcacacaggacctcgct
gaggcccagcctcgcattgaccgggtcgcgctggacatcgtcgaacacttcgaggaagaa
gtcccccagccgttcaaggggatggtcgtcaccacgagcaaggaagcggcgatccgctac
aaggaaacactcgacagcttgaacgggccggagtcccgcgtcgtcatctctgaggggcac
aacgacccagaacaaatcaagcagtggacgcccagcggttccgagaagagccaatacaag
gagtcgttcgtcgatcccaacagcgaagttgagttactcatcgtctgcgatatgcttctg
acgggcttcgacgcgccggtagctcaggtgatgtacctcgacaagccgctccgtgagcac
agtctattgcaggcgatcgctcgcgtaaaccggcccttcgaggagaagacccacggactc
atcatcgactactacggcgtctcggacgagctgaaggaggcacttgcgatgttcagctcg
agggacgtcgagcgggcgatggtaccggtcaaagacaaacaggaggaccttgaagcagcc
cacaaccgggcggtatcgttctttgacgatctcgatgcagtggagaagtgtgtgcagtcg
ctcgaaccagacgaccggcgcatcgagttcaagaacgcgttcaaacgcttctcgaaactg
atggacatcgtcctcccggacccgatggccaacccctaccgcgacgatttagagcagctc
agcacgatctacgggaaagcgaaggagcgctatcgcgacgagacgatgaacctcgaaggc
gcgggggccaaggtccgagagctcatccaggaccacatcacttcgcagggaatcgagatc
ttgaacgatgaaccggtatccatcatggacgaggtcgaatttgatgcgagacttgaagac
ctagagagcgacgaggcccgtgcgagtgagatgcagaatgcgatcaagcacgagatcaac
gttcgcttcgatgaggacccagtgcaatacgggtctctcaaagagcggcttgaggaactc
atcgaaaagtaccgggaaggacggcttagcgaacaggggactatcgaggagttgcggact
ctgatggaggaaatccggtcacgcgacaaggctgcccgtcgcaaaggactccggggcgaa
acagacctatcgttctaccacgcggtcgaggatgtgctggatgaacacgatttcggcgaa
gaggactttgtcgaactcacggccgagttggtcgggactgtcgagaagttcgtcacaaag
gtagagtggaaagagcgaactcacctgcagaatacgatgcggaaagaagtgacggggcaa
ctgtatcgatctgaaatcgacctctcggcagaggaacggcgtgaactcaccaaccgcgtc
atcgaattggcgcgggcacactaccaatga

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