Halorhabdus sp. SVX81: SVXHr_1212
Help
Entry
SVXHr_1212 CDS
T09281
Symbol
sbcC
Name
(GenBank) ATPase involved in DNA repair, SbcC/Rad50
KO
K03546
DNA repair protein SbcC/Rad50
Organism
hasv
Halorhabdus sp. SVX81
Brite
KEGG Orthology (KO) [BR:
hasv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hasv03400
]
SVXHr_1212 (sbcC)
DNA repair and recombination proteins [BR:
hasv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SVXHr_1212 (sbcC)
Archaeal homologous recombinant proteins
SVXHr_1212 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
DUF3584
FapA
AAA_21
SMC_N
AAA_29
AAA_15
AAA_13
SbcC_Walker_B
Baculo_PEP_C
Laminin_II
DUF1664
Nuf2_DHR10-like
COG6_N
CCDC93_CC
AAA_27
ABC_tran
MAD
TPR_MLP1_2
GAS
FliJ
Motif
Other DBs
NCBI-ProteinID:
WEL17383
LinkDB
All DBs
Position
complement(1232396..1235047)
Genome browser
AA seq
883 aa
AA seq
DB search
MEHFKCYADADLRLERGVTVFHGVNGSGKSSLLEACFFALYGARALDRTLDELVTIGAEE
ATVELWFAHGGESYHIKRRVRVRDDRATTVECVLDESDGVVEGARDVRERVASLLRMDHE
AFINCAYVRQGEVNKLINATPSERQDMIDDLLQLGRLEDYRKRASDARVGVGRVLEGKRE
SLSQLESQIKAKEEKELHEQLNDAESELATIREELDRYDDQREAARETLDDAKSILEEYE
QRREELDEIESEIEELTETIESTERKREALGDEISDRRDRREEISDRIESGLDATELSSD
TDRDAVDALIDTLEERDDEIRDEIEQHRLDLQRHRENAESEREDATDAEERAAENREQAE
ELESGLEETRTDLENRRERLTELDSEIESIEETFTDAPVKLGNAESFHEEIADELDAVKS
DLTSLETTIESLEGDIEEAQDLLDAGKCPECGQDVEEAPRVETLGDDRERLADLRAEREE
LEETRETVEARLDRAETLVEQESERDRLLEKRETLAELIAERENSIEETEERIETLRAEA
DELDSQAEQHRESAEESENEAEECREAIAECNERRGELADRIDGLEDIVADFERLDALTD
EIETRQERREQLDEMNDERRDRLGTLRERRSELAEAIDEDRLAEARDDKKRAETYLEEVV
EEIDDREEQRDELQARIGAIENEIEELESLRERREGLAETVEHLESLYEEAEQLQEMYGQ
LRAELRQRNVETLEWMLNDTFDLVYRNDSYDRIELDEDYHLTIYQKDGEALDPDQLSGGE
RALFNLSLRAAIYRLLAEGIEGAAPTPPLILDEPTVFLDSGHVSQLLELIEYMRGEVGVE
QIVVVSHDDELVDAADDLVYVAKDATTNRSRVERRDSPELPAD
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
ttggagcacttcaagtgctacgcggacgccgatttgcggctggaacgcggcgtgacggtc
ttccatggcgtcaacgggagcgggaaatcctcgctgctcgaagcctgcttctttgcgctg
tatggcgctcgcgccctcgatcgcaccctggacgaactcgtcacgatcggggccgaggag
gcgacagtcgaactctggttcgctcacggtggcgagtcctaccacatcaaacgccgggtc
cgcgttcgagacgatcgggcgacgaccgtcgaatgcgtcttggacgaatccgacggcgtg
gtggagggggccagagacgttcgcgagcgcgtcgcgtcgctgctcaggatggaccacgag
gccttcatcaactgtgcgtacgtccgccagggcgaggtcaacaaactcatcaacgcgacg
ccgagcgaacgccaggatatgatcgacgacctcctccagcttggccgcctcgaagactac
cgaaagcgtgccagcgacgcccgggtcggcgtcgggcgggtgctggaaggcaaacgtgag
tccctctctcagctggaatctcaaatcaaggccaaggaggaaaaagagcttcacgagcag
ctcaacgacgccgagagcgaactcgcgacgatccgggaggagctcgaccgctacgacgac
cagcgcgaggccgcccgcgagacgctcgacgacgcgaaatcgatcctcgaggagtacgaa
cagcgccgcgaggaactcgacgagatcgaaagcgagatcgaagagctgactgaaacgatc
gaatcgaccgagcgcaagcgggaggcactcggcgacgaaatatccgatcgccgggaccgc
cgcgaggaaatcagcgaccggatcgaatccgggctcgacgcgaccgagttatcgagtgac
acggatcgggacgccgtcgatgccctgattgataccctcgaagaacgcgacgacgagatt
cgcgacgagatcgagcaacaccgtctcgatctccagcgtcaccgtgagaacgccgagagt
gaacgcgaagacgccactgacgccgaggagcgtgccgccgaaaatcgcgagcaggctgag
gaactcgaatcgggcctcgaagaaacacgcactgatctcgagaaccgccgagagagactc
acagagttggacagcgagatcgaatcgatcgaggagacgttcacggacgcacctgtcaaa
ctcggcaacgcagagtcgttccacgaagaaatcgccgacgaactggacgccgtcaagagc
gatctgacctcgctcgaaacgacgatcgagtccctcgaaggcgacatcgaggaggcccag
gacttactcgacgccggaaagtgtcccgagtgtggccaggacgtcgaggaggcaccgcgc
gtcgagacgctcggagacgatcgcgagcggctggccgaccttcgggccgagcgcgaggag
ttagaggagacccgcgagacagtcgaggcgcggctggaccgtgccgagacactggtcgag
caggaaagcgaacgggatcggctcctggagaaacgcgagacgctcgcggagttgatcgcg
gaacgcgagaattcgatcgaagaaaccgaggaacgcatcgaaacacttcgggctgaagcc
gacgaactggattcccaggccgaacagcaccgcgagtccgccgaggaatccgagaacgaa
gccgaggagtgccgggaggccatcgccgaatgcaacgagcggcgtggcgaactcgccgat
cggatcgacgggctcgaagatatcgtcgcggactttgagcggctggacgccctcaccgac
gagattgagacccgtcaggagcgtcgcgagcaactcgacgaaatgaacgacgagcgccgc
gaccgcctcgggacccttcgggaacgccgctcggaactagccgaggctatcgacgaggac
cgactggccgaggcccgagacgacaagaaacgtgccgagacctatctcgaagaagtcgtc
gaagaaatcgacgatcgcgaagagcagcgggacgaactccaggcacgcatcggggccatc
gaaaacgagatcgaggaactcgaatcgctccgcgaacggcgggaggggctcgccgagacg
gtcgagcatttggagtccctctacgaggaggccgagcagttacaggagatgtacggacaa
ctccgggcggagctgcgccagcgcaacgtcgagaccttggagtggatgctcaacgacacg
ttcgatctcgtctaccggaacgactcttacgaccggattgaactcgatgaggactaccac
ctcacgatctaccagaaggacggcgaggcactcgaccctgaccagctttcgggcggcgaa
cgcgcgctgttcaacctcagccttcgggcggcgatttatcggctgctggccgaggggatc
gaaggggctgcgcccaccccgccgctgatcctcgacgaaccgacggtcttcctcgattcc
ggtcacgtctcgcagttgctggagttgatcgagtacatgcgcggagaggtcggcgtcgag
cagatcgtggtcgtcagccacgacgacgagttggtggacgccgccgacgacctggtgtac
gtcgcgaaggacgcaacgaccaaccgctcgcgcgtcgagcgtcgcgacagcccggagttg
ccggctgattag
DBGET
integrated database retrieval system
